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真鲷(Pagrus major)vasa基因5′端启动子克隆及表达载体构建
  • ISSN号:0029-814X
  • 期刊名称:《海洋与湖沼》
  • 时间:0
  • 分类:Q344[生物学—遗传学]
  • 作者机构:[1]中国科学院海洋研究所,青岛266071, [2]中国科学院研究生院,北京100049
  • 相关基金:国家高技术研究发展计划(863计划)课题,2006AAl0A404号;国家自然科学基金项目,31072212号,41076100号.
中文摘要:

采用染色体步移(Genome walking)的方法克隆了真鲷vasa基因5′侧翼序列,采用生物信息学方法分析潜在的顺式作用元件,并与斑马鱼核心启动子进行比对,在此基础上构建了绿色荧光蛋白表达载体。序列分析结果显示:克隆得到的真鲷vasa基因5′侧翼序列序列长度为2762bp,其中包括TATA-box、CAAT-box、SP-1、GAGA-1、OCT-1、v-Myb、Sox-5、SRY、HNF等可能对vasa基因转录调控起重要作用的顺式作用元件。潜在的核心启动子区与斑马鱼核心启动子具有同源性(61.1%),推测可能对转录调控具有重要的作用。采用PCR方法扩增起始密码5′侧翼全长片段,连接入去除CMV启动子的绿色色荧光蛋白载体,最终成功构建真鲷vasa基因5′侧翼表达载体,为进一步研究分析启动子效率和绿色荧光蛋白在PGCs中的特异表达提供了基础。

英文摘要:

Red seabream (Pagrus major) is a commercially important marine species in China. With the rapid development of marine aquaculture industry, resource conservation and identification of red seabream is increasingly important. Although sperm cryopreservation of the red seabream is relatively successful, little progress has made on embryo cryopreservation. Primordial germ cell (PGC) is the progenitor of the germ cell lineage, giving rise to either egg or sperm, with the potential to create complete individual organisms after fertilization. Cryopreservation of PGCs provides a new way for resource conservation. Vasa, a member of DEAD-box gene family, is strictly expressed in germ cell lineage. It is widely used as a molecular marker to study origin, migration and differentiation of PGCs. The objective of this study is to inves- tigate potential cis-acting elements that involve in the transcription regulation of vasa gene in red seabream and set up a basis for further research on promoter efficiency and isolation of PGCs with GFP special expression. As the vasa 5'UTR reported (GenBank: AB378581) is not long enough to design three nested primers, we first amplified the first intron to get enough information. Next, 5' flanking region of red seabream vasa was amplified from genomic DNA by Genome Walking. Potential transcript factor binding sites were analyzed by bioinformatics method, the potential core promoter was blasted with the core promoter of zebrafish and finally pvasa-EGFP expression vector was constructed. Sequence analysis revealed that the 5' flanking region amplified in this study was 2762bp, and the region contained several potential transcription factor binding sites that may have important function on the gene transcription, such as TATA-box, CAAT-box, SP-1, GAGA-1, Oct-l, v-Myb, Sox-5, SRY and HNF. The potential core promoter of red seabream was similar to that of zebrafish, sug- gesting that it may play important role in the transcription regulation. Based on the above information, ful

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期刊信息
  • 《海洋与湖沼》
  • 北大核心期刊(2011版)
  • 主管单位:中国科学院
  • 主办单位:中国海洋湖沼学会
  • 主编:孙松
  • 地址:青岛市南海路7号中科院海洋所内
  • 邮编:266071
  • 邮箱:
  • 电话:0532-82898753
  • 国际标准刊号:ISSN:0029-814X
  • 国内统一刊号:ISSN:37-1149/P
  • 邮发代号:2-421
  • 获奖情况:
  • 2000年中国科学院优秀期刊一等奖,2000年山东省科委、新闻出版黑署评估优秀级,中国期刊方阵“双百”期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:21021