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福美双诱发肉鸡胫骨软骨发育不良早期生长板消减cDNA文库的构建
  • ISSN号:0578-1752
  • 期刊名称:《中国农业科学》
  • 时间:0
  • 分类:S813.1[农业科学—畜牧学;农业科学—畜牧兽医]
  • 作者机构:[1]山西农业大学动物科技学院,山西太谷030801, [2]华中农业大学动物医学院,武汉430070, [3]华中农业大学食品科技学院,武汉430070, [4]华中农业大学动物医学院农业微生物学国家重点实验室,武汉430070
  • 相关基金:山西省自然科学基金(2009011043-1); 山西农业大学博士科研启动基金; 中国博士后科学基金(20080430984); 国家自然科学基金(30571370 31072179)
中文摘要:

【目的】为应用cDNA芯片技术筛选肉鸡胫骨软骨发育不良(TD)时序性差异表达基因,本研究构建了早期生长板消减cDNA文库。【方法】将7日龄AV肉鸡随机分为两组,对照组(control,C)饲以基础日粮,试验组(thiram diet-fed,T)饲以基础日粮添加福美双100 mg·kg-1,2 d后继续饲以基础日粮,诱发肉鸡TD。应用抑制消减杂交技术(SSH)构建正反向消减cDNA文库,用PCR验证两个文库中克隆的插入片段,随机抽取100个阳性克隆测序,对所测序列同源性分析和功能预测。【结果】从两个文库共获得2 227个有效阳性克隆,插入片段大小主要分布在200—1 000bp之间;所测序列中有97条ESTs与GenBank中的鸡基因序列同源性达到99%,且非冗余度达到68.7%;此外,有3条ESTs未找到同源序列。这些基因具有构成细胞外基质,参与软骨内骨化和骨的重构,调节骨发育,行使信号转导、血管发生,参与电子传递及能量代谢等功能。【结论】成功构建了消减cDNA文库,将为进一步点制cDNA芯片,筛选不同阶段的差异表达基因奠定了基础,也为肉鸡TD机理研究提供新线索。

英文摘要:

【Objective】An experiment was conducted to construct subtracted cDNA library for selecting time series genes differentially expressed in the TD growth plate of broiler chickens at the early stage with cDNA microarray.【Method】 AVIAN(AV) broiler chicks at 7 days of age were randomly divided into two groups.After fasting overnight,they were fed with regular diet(control) or the same diet containing 100 mg/kg thiram for 48h to induce TD(thiram diet-fed).Forward and reverse-subtracted cDNA libraries were generated by suppression subtractive hybridization technology(SSH).Identification of the inserted cDNA fragments in subtractive library was done using PCR.One hundred clones were randomly selected for further DNA sequencing,blast homology analysis and function prediction.【Result】 A total of 2 227 positive clones were obtained and the size of inserts was between 200 bp and 1 000 bp.There were 97 homologous gene sequences shared more than 99% identity with genes known in chicken(Gallus gallus).Non-redundancy of sequenced genes was 68.7%.Meanwhile,3 clones were found to be novel EST as no functional clues were associated with them by bioinformatic analysis.Most of these genes are involved in matrix formation,endochondral ossification and remodelling,developmental regulation,signal transduction,electron transport in mitochondrial respiratory chain and vascularization.【Conclusion】Successfully produced cDNA library would make a good foundation for further printing cDNA microarray,screening differential expression genes of TD growth plates at different stages,and also may provide new insights into understanding the pathogenesis of TD.

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期刊信息
  • 《中国农业科学》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国农业部
  • 主办单位:中国农业科学院 中国农学会
  • 主编:万建民
  • 地址:北京中关村南大街12号中国农业科学院图书馆楼4101-4103室
  • 邮编:100081
  • 邮箱:zgnykx@caas.cn
  • 电话:010-82109808 82106279
  • 国际标准刊号:ISSN:0578-1752
  • 国内统一刊号:ISSN:11-1328/S
  • 邮发代号:2-138
  • 获奖情况:
  • 中国期刊方阵“双高”期刊,第三届中国出版政府奖提名奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘,中国北大核心期刊(2000版)
  • 被引量:85620