位置:成果数据库 > 期刊 > 期刊详情页
Construction of a Normalized Full-Length cDNA Library of Cephalopod Amphioctopus fangsiao and Development of Microsatellite Markers
  • ISSN号:1672-5182
  • 期刊名称:《中国海洋大学学报:英文版》
  • 时间:0
  • 分类:S435.621.2[农业科学—农业昆虫与害虫防治;农业科学—植物保护] S511[农业科学—作物学]
  • 作者机构:[1]Key Laboratory of Marine Ecological Restoration, Shan Dong Marine Resource and Environment Research Institute, Yantai 264006, P. R. China, [2]College of Fisheries and Life Science, Shanghai Ocean University, Shanghai 200120, P. R. China, [3]Key Laboratory of Marine Genetics and Breeding of Ministry of Education, Ocean University of China, Qingdao 266003, P. R. China
  • 相关基金:This study was supported by the National Natural Sci- ence Foundation of China (Nos. 31302215, 31272643), the Shandong Provincial Natural Science Foundation (Nos. BS2014NY010, ZR2013CQ030), and the Shandong Provincial Primary Research and Development Projects (No. 2015GNC110017).
中文摘要:

Amphioctopus fangsiao 是最经济地重要的种类之一并且被认为是水产业的一个候选人。以便便于它的好规模的基因分析,我们成功地构造了一个规范的全身的图书馆并且在这研究开发了一套 microsatellite 标记。规范的全身的图书馆有 6.9 的一个存储能力

英文摘要:

Amphioctopus fangsiao is one of the most economically important species and has been considered to be a candidate for aquaculture. In order to facilitate its fine-scale genetic analyses, we constructed a normalized full-length library successfully and developed a set of microsatellite markers in this study. The normalized full-length library had a storage capacity of 6.9×105 independent clones. The recombination efficiency was 95% and the average size of inserted fragments was longer than 1000 bp. A total of 3440 high quality ESTs were obtained, which were assembled into 1803 unigenes. Of these unigenes, 450(25%) were assigned into 33 Gene Ontology terms, 576(31.9%) into 153 Kyoto Encyclopedia of Genes and Genomes pathways, and 275(15.3%) into 22 Clusters of Orthologous Groups. Seventy-six polymorphic microsatellite markers were identified. The number of alleles per locus ranged from 4 to 17, and the observed and expected heterozygosities varied between 0.167 and 0.967 and between 0.326 and 0.944, respectively. Twelve loci were significantly deviated from Hardy-Weinberg equilibrium after Bonferroni correction and no linkage disequilibrium was found between different loci. This study provided not only a useful resource for the isolation of the functional genes, but also a set of informative microsatellites for the assessment of population structure and conservation genetics of A. fangsiao.

同期刊论文项目
同项目期刊论文
期刊信息
  • 《中国海洋大学学报:英文版》
  • 中国科技核心期刊
  • 主管单位:教育部
  • 主办单位:中国海洋大学
  • 主编:文圣常
  • 地址:青岛市松岭路238号
  • 邮编:266100
  • 邮箱:xbywb@ouc.edu.cn
  • 电话:0532-66782408
  • 国际标准刊号:ISSN:1672-5182
  • 国内统一刊号:ISSN:37-1415/P
  • 邮发代号:24-89
  • 获奖情况:
  • 被美国化学文摘(CA)和美国剑桥科学文摘(CSA)收录
  • 国内外数据库收录:
  • 俄罗斯文摘杂志,美国化学文摘(网络版),英国农业与生物科学研究中心文摘,荷兰文摘与引文数据库,美国剑桥科学文摘,美国科学引文索引(扩展库),美国生物科学数据库,英国动物学记录,中国中国科技核心期刊
  • 被引量:123