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苹果NADP依赖的苹果酸酶基因克隆、序列和表达分析
  • ISSN号:0578-1752
  • 期刊名称:《中国农业科学》
  • 时间:0
  • 分类:S965.3[农业科学—水产养殖;农业科学—水产科学]
  • 作者机构:[1]山东省果树研究所,山东泰安271000
  • 相关基金:山东省果树研究所所长科研基金(2012KY06)、国家自然科学基金项目(31100086)
中文摘要:

【目的】克隆苹果(Malus×domestica B.)中苹果酸代谢的关键酶基因MdNADP-ME,进行序列特征分析,研究MdNADP-ME在苹果中组织表达的情况。【方法】利用RT-PCR技术获得苹果MdNADP-ME1,2,3全长的cDNA序列。对该序列进行生物信息学分析,采用荧光实时定量PCR技术研究MdNADP-ME1,2,3的组织表达。【结果】测序结果显示,获得的3个NADP-苹果酸酶基因(MdNADP-ME1、MdNADP-ME2和MdNADP-ME3;GenBank登录号为JX971883、JX971884和JX971885),其ORF分别为1 512、1 782和1 926 bp,推测其分别编码503、593和641个氨基酸的多肽。氨基酸序列和结构分析显示,这3个基因均含有5个保守的氨基酸区域(motif I-V),含有2个功能结构域:malic和NAD_bind_1_malic_enz。进化树分析结果显示,MdNADP-ME1和MdNADP-ME2属于双子叶植物细胞质NADP-ME型,MdNADP-ME3属于双子叶植物质体NADP-ME型。荧光实时定量PCR结果表明,MdNADP-ME1-3在被检测的组织中均有表达,但表达差异明显。【结论】MdNADP-ME1-3属于植物NADP-ME家族,结构高度保守,并且在苹果的不同组织中有不同表达模式。

英文摘要:

[Objective] This study is aimed to characterize the genes of MdNADP-MEs involved in malic acid metabolism in MalusXdomestiea B. by gene cloning, sequence and expression of MdNADP-MEs in different tissues. [Method] Three full-length eDNA sequences of MdNADP-ME1,2,3 were isolated by RT-PCR. The obtained eDNA sequences and the deduced amino acid sequences were analyzed with bioinformatics methods, qRT-PCR was used to assess the expression of MdNADP-MEs in different tissues. [Result] The sequencing results showed that three cDNAs (designated as MdNADP-ME1, 2 and 3; GenBank Accession No. JX971883, JX971884 and JX971885) were 1 512 bp, 1 782 bp and 1 926 bp. They contained an open reading frame (ORF) of 1 512 bp, 1 782 bp and 1 926 bp, respectively, and their ORFs encoded an protein with 503, 593 and 641 amino acids, respectively. Amino acid sequence and structure analysis indicated that MdNADP-MEs contained five conservative amino acid areas (motif I-V) and two functional structure domains: malic and NAD_bind 1 malic_enz. The result of phylogenetic analysis showed that MdNADP-ME1 and 2 belonged to cytosolie dicot NADP-ME (group I), MdNADP-ME3 belonged to plastidic dicot NADP-ME. qRT-PCR result showed that MdNADP-MEs were constitutively expressed in all examined tissues, but showed different expression levels. [ Conclusion ] MdNADP-ME 1,2,3 belong to NADP-ME family, possess highly conserved structures, and show different expression patterns in different tissues of apple.

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期刊信息
  • 《中国农业科学》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国农业部
  • 主办单位:中国农业科学院 中国农学会
  • 主编:万建民
  • 地址:北京中关村南大街12号中国农业科学院图书馆楼4101-4103室
  • 邮编:100081
  • 邮箱:zgnykx@caas.cn
  • 电话:010-82109808 82106279
  • 国际标准刊号:ISSN:0578-1752
  • 国内统一刊号:ISSN:11-1328/S
  • 邮发代号:2-138
  • 获奖情况:
  • 中国期刊方阵“双高”期刊,第三届中国出版政府奖提名奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘,中国北大核心期刊(2000版)
  • 被引量:85620