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绿盲蝽TRPA1基因的鉴定及功能分析
  • ISSN号:0578-1752
  • 期刊名称:《中国农业科学》
  • 时间:0
  • 分类:S436.65[农业科学—农业昆虫与害虫防治;农业科学—植物保护]
  • 作者机构:[1]中国农业科学院植物保护研究所植物病虫害生物学国家重点实验室,北京100193
  • 相关基金:国家“973”计划(2012CB114104); 国家自然科学基金(31471833)
中文摘要:

【目的】克隆绿盲蝽(Apolygus lucorum)TRPA1基因,明确其在成虫不同组织中的表达分布,研究绿盲蝽TRPA1基因的功能,阐明绿盲蝽感受温度的分子基础。【方法】在绿盲蝽转录组测序的基础上,通过生物信息学方法分析转录组数据,得到编码绿盲蝽TRPA1基因的c DNA序列片段。根据已知的c DNA序列,设计引物。采用RT-PCR及RACE(rapid-amplification of c DNA ends)技术克隆TRPA1基因的全长序列,并通过DNAMAN软件及BLAST分析测序结果。测序正确后,使用在线工具SMART及TMpred预测TRPA1蛋白的锚蛋白重复序列(Ankyrin repeats)及跨膜结构域序列。通过序列比对,构建昆虫TRP(transient receptor potential)通道的家族进化树,分析绿盲蝽TRPA1与其他物种同源基因的相似性及进化地位。以GADPH为内参基因,利用RT-PCR检测绿盲蝽TRPA1在成虫触角、头、喙、足、腹等不同组织中的相对表达量。通过爪蟾卵母细胞体外表达结合双电极电压钳记录技术研究绿盲蝽TRPA1对温度刺激的反应。【结果】通过绿盲蝽转录组数据预测得到TRPA1基因的4个c DNA序列片段,经过RT-PCR及RACE技术克隆得到了绿盲蝽TRPA1的全长序列,并命名为Aluc TRPA1。Aluc TRPA1开放阅读框全长3 672 bp,编码1 223个氨基酸。通过在线工具SMART及TMpred预测分析结果表明,Aluc TRPA1含有16个锚蛋白重复序列结构及6个保守的跨膜结构域。序列比对及进化树分析结果显示,昆虫TRPA家族包含TRPA1、Painless、Pyrexia及Water witch,Aluc TRPA1属于昆虫TRPA1亚家族。Aluc TRPA1与其他昆虫的同源基因具有很高的相似性,特别是与同属半翅目的豌豆蚜(Acyrthosiphon pisum)的同源性高达65.1%。成虫组织表达谱分析结果表明,Aluc TRPA1在成虫触角中的表达量最高,头、喙、足、腹中也都有表达。爪蟾卵母细胞体外表达结合双电极电压钳记录结果表明20℃至40℃逐渐上升的温度可以直接激活Aluc TRPA

英文摘要:

【Objective】 The objective of this study is to obtain the TRPA1 gene in Apolygus lucorum, characterize its expression profiles in different tissues of adult, illustrate its functions through heterologous expression system of Xenopus oocytes, and further to explain the molecular mechanism of thermosensation in A. lucorum.【Method】The transcriptome of A. lucorum was sequenced and analyzed, and several c DNA fragments encoding A. lucorum TRPA1 were identified. And then specific primers for RT-PCR and RACE were designed. The full-length c DNA sequence encoding Aluc TRPA1 was cloned via RACE and RT-PCR techniques. The c DNA sequence encoding TRPA1 gene was analyzed by DNAMAN software and BLAST. Then ankyrin repeats and transmembrane domains were predicted with SMART and TMpred. The phylogenetic tree of TRPs in insects was constructed to analyze the evolutionary relationship between A. lucorum and other insects. RT-PCR was performed to detect the relative-expression of TRPA1 in different tissues of the adults. Two-electrode voltage clamp electrophysiological recording was introduced to demonstrate the function of TRPA1 in vitro. 【Result】 Four fragment sequences of the TRPA1 gene were found according to the results of transcriptome analysis. The full-length sequence of TRPA1 gene named Aluc TRPA1 was further obtained using RACE and RT-PCR techniques, which is 3 672 bp and encodes 1 223 amino acids. Aluc TRPA1 contained 6 conserved transmembrane domains and 16 ankyrin repeats, which predicted by SMART and TMpred. The results of multiple alignment and phylogenetic tree analysis showed that TRPA of insects contains TRPA1, Painless, Pyrexia and Water witch, and Aluc TRPA1 clustered into the branch of TRPA1. Aluc TRPA1 is highly similar to the homologs from other insects, especially the pea aphids(Acyrthosiphon pisum), which also belongs to the Hemiptera, with the identity of 65.1%. Expression profiles showed that Aluc TRPA1 was expressed in antennae at the highest level among different tissues. In the Xenopus-

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期刊信息
  • 《中国农业科学》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国农业部
  • 主办单位:中国农业科学院 中国农学会
  • 主编:万建民
  • 地址:北京中关村南大街12号中国农业科学院图书馆楼4101-4103室
  • 邮编:100081
  • 邮箱:zgnykx@caas.cn
  • 电话:010-82109808 82106279
  • 国际标准刊号:ISSN:0578-1752
  • 国内统一刊号:ISSN:11-1328/S
  • 邮发代号:2-138
  • 获奖情况:
  • 中国期刊方阵“双高”期刊,第三届中国出版政府奖提名奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘,中国北大核心期刊(2000版)
  • 被引量:85620