目的:建立适合新疆贝母属植物总DNA的ISSR-PCR优化反应体系,为新疆贝母属8种药用贝母品种鉴定和遗传多样性研究提供依据。方法:综合利用单因素实验和L16(45)正交试验,对因素Taq DNA聚合酶、d NTPs、Mg2+、引物浓度、模板DNA含量进行优化,并考察循环次数、延长时间及退火温度。结果:每个因素的不同水平对PCR反应有显著影响,其中Mg2+影响最大。新疆贝母属植物总DNA的ISSR-PCR最适体系为50μL:5μL 10×Buffer、2.5 mmol/L Mg2+、0.30 mmol/L d NTPs、0.8μmol/L引物、0.75 U Taq酶、1.0 ng/μL模板DNA、33.35μL dd H2O。循环次数为45 cycle,延伸时间10 min,引物UBC853的最适退火温度为49.8℃。结论:建立的新疆贝母属植物总DNA的ISSR-PCR反应体系经23份新疆贝母属8种药用贝母样品检验,ISSR-PCR扩增效果显著,证明该体系具有较高的稳定性和可重现性,为新疆贝母属8种药用贝母遗传多样性的分子标记研究奠定基础。
Objective: To optimize the ISSR-PCR reaction system of 8 species of plants in FritiUaria L. from Xinjiang which will provide a scientific basis for identification and genetic diversity analysis. Meth- ods : Comprehensive utilization of single factor experiment and L16 (4^5 ) orthogonal test, the factors of Taq DNA polymerase, dNTPs, Mg^2+ , concentration of primers, template DNA content is optimized, and the effects of cycle number, extension of time and annealing temperature. Results: Every factor in different levels had the significant effects on the result of PCR, and the most remarkable factor was the concentra- tion of Mg^2+. ISSR-PCR optimal system for total DNA of plants in Fritillaria L. from Xinjiang as the 50 μl:5 μl 10 × Buffer, 2.5 mmol/L Mg^2+ , 0.30 mmol/L dNTPs, 0.8 μmol/L primer, 0.75 U Taq DNA polymerase, 1.0 ng/μl template DNA, 33.35 μl ddH20. The cycle times of 45 cycle, extended time of 10 min, the suitable annealing temperature of primer UBC853 was 49.8 ℃. Conclusion : The established and optimized ISSR reaction system is stable and credible and ISSR-PCR amplification effect is obvious according to the testing results of 23 samples of 8 species of plants in Fritillaria L. from Xinjiang, and lay the foundation for the study of molecular markers of genetic diversity in 8 species of plants in Fritillaria L. from Xinjiang.