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OY—TES-1在肿瘤组织中的表达及生物信息学分析
  • ISSN号:1001-1633
  • 期刊名称:《解剖学杂志》
  • 时间:0
  • 分类:R512.63[医药卫生—临床医学;医药卫生—内科学] R730.2[医药卫生—肿瘤;医药卫生—临床医学]
  • 作者机构:[1]广西中医学院组织学与胚胎学教研室,南宁530001, [2]广西中医学院一附院妇产科,南宁530001, [3]广西医科大学一附院神经外科,南宁530021, [4]广西医科大学组织学与胚胎学教研室,南宁530021
  • 相关基金:国家自然科学基金(30360026,30760055);广西科学基金(桂科自0728148)
中文摘要:

目的:了解OY-TES-1mRNA及其蛋白在肿瘤组织中的表达情况,初步探讨其结构与功能。方法:利用定量PCR和免疫组织化学技术检测肿瘤组织中OY—TES-1的表达,结合生物信息学技术分析其结构和功能。结果:肿瘤与瘤旁组织中目的基因mRNA的表达频率分别为61.95%和59.57%,其中肝细胞癌72.97%、脑膜瘤55.5s%、胶质瘤57.50%,肿瘤组织中该基因mRNA的表达量明显高于瘤旁组织。目的蛋白在胃癌的阳性率为25.00%,肝细胞癌40.00%,结肠癌46.67%,而瘤旁组织与肺癌均为阴性反应。生物信息学分析提示目的蛋白富含螺旋结构,具有一个信号肽、多种修饰位点及sp32结构域,存在较多T、B细胞表位且主要位于目的蛋白的羧基端。结论:OY-TES-1mRNA及其蛋白均可在肿瘤组织中表达,生物信息学分析结果提示该蛋白功能的多样性。

英文摘要:

Objective: To explore gene expression characteristics of OY-TES-1 mRNA and protein level in tumor tissues, and predict its structure and function by bioinformatics analysis. Methods: Tumor tissues were tested to explore the expression of OY-TES-1 mRNA and protein by quantitative PCR and immunohistochemistry staining. The structure and function of OY TES-1 were predicted by bioinformatics techniques. Results: The expressive frequencies of OY-TES-1 mRNA in tumor and adjacent tumor tissues were 61.95% and 59.57% respectively, including 72. 97% in hepatocellular carcinoma, 55.56% in meningioma and 57.50% in glioma, and the expression level of OY-TES-1 mRNA in tumor tissues was higher than that in adjacent tumor tissues. The expressive rate of OY-TES-1 protein in tumor tissues was 25.00% in gastric carcinoma, 40. 00% in hepatocellular carcinoma, and 46.67% in colonma tissues, while adjacent tumor tissues and lung cancer showed negative. Bioinformatics method indicated that target protein was full of helices with a signal peptide, multitude modit'ication sites and sp32 domains. Immunogenicity of OY-TES-1 protein was found with many T cell epitopes and B cell epitopes, which mainly exist in carhoxyl terminus of the target protein. Conclusion: Both OY-TES-1 mRNA and protein could be found in tumor tissues, and the functional diversity of this protein can be predicted by bioinformatics techniques.

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期刊信息
  • 《解剖学杂志》
  • 北大核心期刊(2011版)
  • 主管单位:中国科学技术协会
  • 主办单位:中国解剖学会
  • 主编:张传森
  • 地址:上海市翔殷路800号
  • 邮编:200433
  • 邮箱:jpxzz01@126.com
  • 电话:021-81870955
  • 国际标准刊号:ISSN:1001-1633
  • 国内统一刊号:ISSN:31-1285/R
  • 邮发代号:4-380
  • 获奖情况:
  • 国内外数据库收录:
  • 美国化学文摘(网络版),日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:12391