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东乡野生稻及其渐渗系应答低磷胁迫的基因差异表达分析
  • ISSN号:1000-4025
  • 期刊名称:《西北植物学报》
  • 时间:0
  • 分类:Q789[生物学—分子生物学]
  • 作者机构:江西师范大学生命科学学院,南昌330022
  • 相关基金:国家自然科学基金(31260255); 江西省教育厅科技计划(GJJ12184); 江西省科技支撑计划(20122BBF60064); 江西省青年科学家培养计划(20112BCB23007)
中文摘要:

以东乡野生稻耐低磷渐渗系IL171及其双亲(栽培稻‘协青早B’和东乡野生稻)为试材,采用cDNA-AFLP技术分析其幼苗期应答低磷胁迫的差异表达谱特征,并采用实时荧光定量PCR分析验证差异表达基因的表达特性,为探究东乡野生稻耐低磷胁迫的分子机制、发掘耐低磷相关的基因奠定基础。结果显示:(1)基于17对扩增效果较好的cDNA-AFLP引物分析发现,不同胁迫时间的参试材料与其对照组(正常磷水平)相比,具有很多(20~159个)上调或下调表达的差异片段。(2)与‘协青早B’相比,IL171中特异性上调的差异带有36条,下调表达61条,而东乡野生稻中分别有79条和136条;IL171与东乡野生稻共有的上调差异带为13条,下调差异带有15条。(3)回收纯化其中60条特异性差异表达条带,最终克隆测序获得50个差异表达基因片段TDFs;通过Blast比对和功能分析,可将TDFs分为8类,包括能量与代谢、基因表达调控、信号转导和转录因子等。(4)实时荧光定量PCR验证其中6个TDFs发现,各差异片段的荧光定量PCR表达模式与cDNA-AFLP结果一致,表明该实验的cDNAAFLP差异表达结果可靠,东乡野生稻的部分耐低磷相关基因已成功导入到渐渗系中,是发掘利用东乡野生稻耐低磷相关基因、探究其耐低磷分子机制的重要资源。

英文摘要:

In the present study,the phosphorus-deficiency tolerance introgression line IL171 and its parents(Oryza sativa cv.‘Xieqingzao B'and Dongxiang wild rice)were used to investigate the differential expression genes at early seedling stage by cDNA-AFLP technique under the phosphorus-deficiency stress condition.Real-time fluorescent quantitative PCR was used to verify the differentially expressed genes.(1)cDNA-AFLP analysis revealed that numerous cDNA fragments(20-159)were obtained in each material under the phosphorus-deficiency condition compared to the control(normal phosphorus level).(2)Compared with‘Xieqingzao B',36 and 61cDNA fragments were differentially up-and down-regulated in IL171,respectively.In Dongxiang wild rice line,79 and 136cDNA fragments were differentially up-and down-regu-lated,respectively.Further analysis showed that IL171 and Dongxiang wild rice shared the same expression pattern at 13up-regulated loci and 15down-regulated loci.(3)Among the 60 recovered and sequenced TDFs(transcript-derived fragments),50 of them were obtained and their functions were determined through Blast search against the RAP-DB database.The functions of them were grouped into eight classes,including energy and metabolism,regulating genes,signal transduction and transcription factors et al.(4)Six above functional genes were subjected to real-time fluorescentquantitative PCR(qRT-PCR)analysis which was all in agreement with those of the cDNA-AFLP analysis,comfirming that cDNA-AFLP was reliable in detecting differentially expressed gens involved in responding to the phosphorus-deficiency stress.The results in this study suggested that partial alien DNA fragments of Dongxiang wild rice related to phosphorus-deficiency tolerance has been transferred into the introgression lines and they could be acted as excellent bridging germplasm in exploring and utilizing the phosphorus-deficiency tolerant genes in rice.In additon,the introgression linses derived from Dongxiang wild rice can be use

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期刊信息
  • 《西北植物学报》
  • 北大核心期刊(2011版)
  • 主管单位:中华人民共和国教育部
  • 主办单位:西北农林科技大学 陕西省植物学会
  • 主编:赵忠
  • 地址:陕西杨陵邰城路3号西北农林科技大学
  • 邮编:712100
  • 邮箱:xbzwxb@vip.163.com
  • 电话:029-87082936
  • 国际标准刊号:ISSN:1000-4025
  • 国内统一刊号:ISSN:61-1091/Q
  • 邮发代号:52-73
  • 获奖情况:
  • 全国优秀期刊,中国自然科学核心期刊,中国期刊方阵“双效”期刊
  • 国内外数据库收录:
  • 俄罗斯文摘杂志,美国化学文摘(网络版),英国农业与生物科学研究中心文摘,美国生物科学数据库,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版)
  • 被引量:46104