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玉米大斑病菌漆酶基因Stlac2结构分析及原核表达
  • ISSN号:0578-1752
  • 期刊名称:《中国农业科学》
  • 时间:0
  • 分类:S435.131.4[农业科学—农业昆虫与害虫防治;农业科学—植物保护]
  • 作者机构:河北农业大学河北省植物生理与分子病理学重点实验室,河北保定071001
  • 相关基金:国家自然科学基金(31101402); 国家玉米产业技术体系(CARS-02-12); 河北省高等学校科学技术研究项目(ZD2014053,QN2014091)
中文摘要:

【目的】对玉米大斑病菌(Setosphaeria turcica)漆酶基因Stlac2进行生物信息学分析,推测其蛋白功能,探究木质素降解过程中产生的小分子物质对Stlac2表达的影响,并对其进行克隆及原核表达,以便深入研究该基因在病菌生长、发育及致病过程中的作用。【方法】通过NCBI查询获得玉米大斑病菌EOA90070(Stlac2)基因的全序列,通过Clustal X与马尔尼菲青霉菌(Penicillium marneffei)PbrB(PMAA_082060)基因、烟曲霉(Aspergillus fumigatus)Abr2(AFUA_2G17530)基因、构巢曲菌(Aspergillus nidulans)YA(AN6635)基因等漆酶家族基因进行蛋白序列比对,查看Stlac2中的铜离子结合位点,利用在线软件SOPMA和ProtParam对其二级结构及理化性质进行检测,通过SWISS-MODEL对Stlac2蛋白质的三维结构进行预测,采用SAVES对三维结构进行评价。通过对ABTS的氧化试验确定木质素降解过程中产生的小分子物质对玉米大斑病菌漆酶产量的影响;利用RT-qPCR方法分析小分子物质对Stlac2表达规律的影响;采用原核表达系统,以pET-30a表达载体为框架,对其进行原核表达,并将表达蛋白纯化,以ABTS为底物,420 nm下检测漆酶活性。【结果】Stlac2具有典型的Cu离子结合位点,与漆酶典型的Cu离子结构域相似。其蛋白二级结构中α-螺旋、延伸链、β-转角、无规则卷曲所占比例分别为18.59%、25.63%、11.91%和43.86%,分子量为61.64 k D,等电点为5.00,平均疏水性为-0.37,表明其为亲水蛋白。当在PDA中添加0.01 g·L^-1香草醛、4-羟基苯甲醛、丁香醛、香草酸、4-羟基苯甲酸和香兰素时,玉米大斑病菌胞外漆酶的产量为香草酸〉香兰素〉4-羟基苯甲醛〉4-羟基苯甲酸〉丁香醛〉对照。而在4-羟基苯甲醛和4-羟基苯甲酸存在时,玉米大斑病菌Stlac2的相对表达量明显升高,约为对照的5—8倍。利用原核表达系统,在67 k D处成功诱导表达出一条特异性蛋白条带,大量?

英文摘要:

【Objective】The objective of this study is to analyze the bioinformatics and infer the functions of Stlac2 in Setosphaeria turcica, research on the effects of substrates generated in the process of lignin degradation on the relative expression of Stlac2. For further study on the function of Stlac2 in the growth, development, and pathogenicity, the Stlac2 was successfully expressed by prokaryotic expression system. 【Method】The protein sequences of Stlac2 were obtained through NCBI and aligned with the known laccases such as Penicillium marneffei PbrB(PMAA_082060), Aspergillus fumigatus Abr2(AFUA_2G17530), and Aspergillus nidulans YA(AN6635) by Clustal X for the Cu ion binding sites. The secondary structure and biochemical properties were predicted online by online softwares SOPMA and Prot Param, and the three-dimensional structure was modelled by SWISS-MODEL, and analyzed by SAVES. The effects of lignin degradation substrates on the expression of extracellular laccase were measured by oxidazing ABTS and the effect on the relative expression of specific gene Stlac2 was analyzed by using RT-qPCR. Stlac2 was fused into the pET-30 a plasmid and expressed by prokaryotic expression system. The protein Stlac2 expressed by prokaryotic cell was extracted and the laccase activity was detected using ABTS as substrate at 420 nm.【Result】 Stlac2 had typical sites bonding with Cu ion. The proportion of α-helix, extended strand, β-turn and random coil were 18.59%, 25.63%, 11.91% and 43.86%, respectively. The protein molecular weight is 61.64 k D, pI is 5.00, grand average of hydropathicity is-0.37, indicating Stlac2 is a hydrophilic protein. The effect of lignin degradation substrates on the production of extracellular laccase was vanillic acid 〉 vanillin 〉 4-hydroxybenzaidehyde〉4-hydroxybenzoic acid〉syringaldehyde〉CK. The relative expression of Stlac2 was increased about 5-8 folds compared with CK under the substrates 4-hydroxybenzoic acid and 4-hydroxybenzaidehyde conditions. Stlac2 protein wa

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期刊信息
  • 《中国农业科学》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国农业部
  • 主办单位:中国农业科学院 中国农学会
  • 主编:万建民
  • 地址:北京中关村南大街12号中国农业科学院图书馆楼4101-4103室
  • 邮编:100081
  • 邮箱:zgnykx@caas.cn
  • 电话:010-82109808 82106279
  • 国际标准刊号:ISSN:0578-1752
  • 国内统一刊号:ISSN:11-1328/S
  • 邮发代号:2-138
  • 获奖情况:
  • 中国期刊方阵“双高”期刊,第三届中国出版政府奖提名奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘,中国北大核心期刊(2000版)
  • 被引量:85620