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基于RNA-Seq技术分析白藜芦醇对副溶血弧菌生物被膜的抑制作用
  • ISSN号:0001-6209
  • 期刊名称:《微生物学报》
  • 时间:0
  • 分类:Q932[生物学—微生物学]
  • 作者机构:浙江工商大学食品与生物工程学院,浙江杭州310018
  • 相关基金:国家自然科学基金(31271954); 浙江省自然科学基金(LY15C200001); 研究生科研创新基金项目(3100XJ1514134)~~
中文摘要:

【目的】利用可食用植物素抑制致病菌生物被膜受到广泛的关注。本文研究分析白藜芦醇对水产品致病菌副溶血性弧菌(Vibrio parahaemolyticus)生物被膜形成的影响及重要的调控基因。【方法】研究测定亚抑菌浓度白藜芦醇对V.parahaemolyticus生物被膜形成和胞外多糖分泌的影响,采用RNA-Seq技术分析白藜芦醇作用下V.parahaemolyticus基因表达水平变化,并利用荧光定量PCR方法验证部分差异表达基因。【结果】白藜芦醇对V.parahaemolyticus的最小抑菌浓度为20μg/m L,亚抑菌浓度5μg/m L和10μg/m L作用下能显著抑制该菌的生物被膜形成和胞外多糖产量(P〈0.05),扫描电镜观察发现细菌的粘附量和胞外分泌物显著减少。V.parahaemolyticus在10μg/m L白藜芦醇作用下共检测到106个基因表达量发生显著变化(P〈0.05),其中上调基因约占22.6%,下调基因约占77.4%。这些基因主要在7条代谢通路中被显著富集,其中外膜蛋白(W,Yed S,Omp K)、群体感应(Lux S)、鞭毛蛋白(Fla A)、菌毛蛋白(Pil Q)、溶血素分泌蛋白等14个调控基因可能与V.parahaemolyticus生物被膜有关,呈现显著下调表达。荧光定量PCR发现lux S、trh、tlh和fla A 4个基因在白藜芦醇作用后表现不同程度的显著下降,与转录组结果一致。【结论】白藜芦醇抑制V.parahaemolyticus生物被膜形成是一个多基因参与、多个生物过程协同调控的过程,其主要通过干扰V.parahaemolyticus新陈代谢过程、群体感应系统、膜蛋白分泌通路,抑制细胞的粘附和生物被膜形成。研究为揭示白藜芦醇抗生物被膜的分子机制提供参考。

英文摘要:

[Objective] Food phytochemicals as biofilm inhibitor of pathogens have been highlighted. Our study aimed to investigate the effects of resveratrol on biofilm formation of an aquatic pathogen Vibrio parahaemolyticus, and to elucidate the important regulatory genes. [Methods] In the subinhibitory concentrations, the inhibition of resveratrol aganist biofilm and exopolysaccharides of V. parahaemolyticus was detected, and the differentially expressed genes were analyzed based on RNA-Seq. Four genes involved in biofilm formation was validated by q RT-PCR. [Results]The minimum inhibitory concentration of resveratrol against V. parahaemolyticus was 20 μg/m L. Resveratrol at the subinhibitory concentration of 5 μg/m L and 10 μg/m L significantly decreased the biofilm development and exopolysaccharides production in V. parahaemolyticus(P〈0.05). Scanning electron microscopy micrographs showed a significant reduction of adherence and extracellular polymeric substances. RNA-Seq analysis revealed that 22.6%up-regulated and 77.4% down-regulated gene(P〈0.05) after treatment by 10 μg/m L resveratrol among 106 differential gene expressions. These differential genes in V. parahaemolyticu focused on 7 metabolic pathways, and 14 genes involved in biofilm formation were down-regulated by resveratrol, such as outer membrane protein(W, Yed S,Omp K), quorum sensing(Lux S), flagellin(Fla A), fimbrial assembly protein(Pil Q), hemolysin secreted protein. q RTPCR confirmed that the expressions of lux S, trh, tlh and fla A, was significantly repressed in the presence of resveratrol, which was consistent with transcriptomics data. [Conclusion] Inhibitory activity of resveratrol on biofilm formation was assicated with multiple genes and diverse cellular processes in V. parahaemolyticus. These findings suggest that resveratrol would disturb various metabolic pathways, particularly quorum sensing system, adhesion process and membrane proteins secretion, resulting in inhibition of attachment and biofilm development

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期刊信息
  • 《微生物学报》
  • 中国科技核心期刊
  • 主管单位:中国科学院
  • 主办单位:中国微生物学会 中国科学院微生物研究所
  • 主编:谭华荣
  • 地址:北京市朝阳区北辰西路3号中国科学院微生物研究所B401室
  • 邮编:100101
  • 邮箱:actamicro@sun.im.ac.cn
  • 电话:010-64807516
  • 国际标准刊号:ISSN:0001-6209
  • 国内统一刊号:ISSN:11-1995/Q
  • 邮发代号:2-504
  • 获奖情况:
  • 国家优秀期刊二等奖,中科院优秀期刊二等奖,中国科协首届优秀科技期刊二等奖
  • 国内外数据库收录:
  • 俄罗斯文摘杂志,美国化学文摘(网络版),波兰哥白尼索引,荷兰文摘与引文数据库,美国生物医学检索系统,美国生物科学数据库,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:21879