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小鼠肾显微切片小管区域自动识别
  • ISSN号:1673-7571
  • 期刊名称:《中国数字医学》
  • 分类:R783.5[医药卫生—口腔医学;医药卫生—临床医学]
  • 作者机构:[1]中国医科大学基础医学院组织学与胚胎学教研室,110001
  • 相关基金:人胚胎肾微细结构三维重建一基于计算机辅助的连续切片追踪技术(编号:31171401);基于连续切片的数字化三维重建小鼠发育肾单位(编号:30871313)
中文摘要:

目的:组织或器官微细结构的三维构建一直以来就是医学形态学研究的重要手段。之前的工作已经可以建立组织三维结构,但都通过人工方法处理,费时费力且不能大量构建目标区域。对小鼠肾显微切片小管区域自动识别进行探索,为目标自动追踪打下基础。方法:通过标准连续切片制作和染色方法,并拍照获得肾小管显微图像。对图像进行预处理、二值化、边缘检测、形态学操作、空洞清除、边界识别检测出肾小管边界的位置,从而对肾小管区域进行识别。结果:通过30张图片进行形态学专家人工辨识对比,设计的方法总体准确率在87%。漏检主要存在于小管弯折和过细部位,误检主要存在于肾小球附近。结论:作为肾小管自动追踪和三维重建工作的一部分,证实了自动提取目标区域的可行性,为肾小管的自动跟踪及三维重建做前期工作。

英文摘要:

Objective: Three-dimensional(3-D)reconstruction for fine structure of tissue or organ is an important method for morphology study in medicine. 3-D structure has been established in previous work, It is time-consuming and tedious as the procedure is all done manually. In this study, automatic tubules segmentation is studied for automatic tracing. Methods: Kidney sections are processed in a standard sectioning and staining procedure, the captured by a microscope. These images are processed under binarization, edge detection, morphological operations, hole-remove, boundary identification to detect tubular position. Results: 30 images are used to test accuracy rate. Images are identified by morphology experts, and then recognized in this proposed method. The overall accuracy rate is 87%. Undetected tubules are mainly bend or too tiny;false detection are mainly near glomerular. Conclusions:As a part job of automat tracking and three-dimensional reconstruction of tubular, this article is the preliminary work and confirmed the feasibility of automatic extraction of the target tubular.

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期刊信息
  • 《中国数字医学》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国卫生部
  • 主办单位:卫生部医院管理研究所
  • 主编:李包罗
  • 地址:北京市朝阳区光华路甲8号和乔大厦A座528A室
  • 邮编:100026
  • 邮箱:digmedyiliao@163.com
  • 电话:010-65815163 82327388
  • 国际标准刊号:ISSN:1673-7571
  • 国内统一刊号:ISSN:11-5550/R
  • 邮发代号:80-133
  • 获奖情况:
  • 国内外数据库收录:
  • 被引量:7274