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东乡野生稻渐渗系基因组结构变化及多样性分析
  • ISSN号:0517-6611
  • 期刊名称:安徽农业科学
  • 时间:0
  • 页码:1336-1339
  • 分类:S[农业科学]
  • 作者机构:[1]江西师范大学生命科学学院,江西南昌330022, [2]江西省农业科学水稻研究所,江西省水稻生理及遗传重点实验室,江西南昌330200
  • 相关基金:国家自然基金项目(30860120,30900781),江西省教育厅科技计划项目(GJJ09464),江西省自然基金(2008GQN0059).
  • 相关项目:东乡野生稻基因渗入系的构建及其遗传与表观遗传研究
中文摘要:

[目的】研究东乡野生稻渐渗系基因组结构变化及对其进行多样性分析。[方法]以东乡野生稻(O.rufipogonGriff.,供体)和栽培稻协青早B(O.sativasp.indicaKato.,受体)构建的Bc,R渐渗群体为研究材料,利用筛选出的分布在12对染色体上的25对SSR引物对群体中的239个株系进行多态性分析。[结果]适25个微卫星位点都有东乡野生稻DNA片段不同程度的渗入,群体均大部分保留亲本协青早B或东乡野生稻的DNA序列。渐渗系基因组中平均受体纯合条带百分率为78.13%,最高达94.98%(引物为RM131),最低为60.25%(引物为RM171)。平均供体纯合条带百分率为13.37%,最高达32.64%(引物为RM171),最低为2.93%(RM1095)。群体中还存在一些杂合位点,平均杂合率为5.62%,最高达10.04%(引物为RM401)。此外,BC1F6渐渗群体中发现有双亲条带的丢失和一些双亲所没有的新条带出现,其中平均亲本条带丢失率为2.88%,最高达13.39%(引物为RM311),最低为0(引物为RM401),平均新带率为1%。高世代渐渗群体平均Mi’s基因多样性(胁)和平均Shannon’s信息多样性指数(Jr)分别为O.276和0.457。[结论]通过远缘杂交渐渗系发生了广泛遗传与表观遗传变异,扩大了遗传变异基础,为水稻品种改良与种质创新奠定了重要基础。

英文摘要:

[Objective] The aim of the study was to make research on genomic struc- ture variation and variety analysis of Dongxiang wild rice. [Method] Introgression groups of BC1F6 were based on donor of Oryza rufipogon Griff. and receptor of O. sativa sp. indica Kate. Strains of 239 in the group were analyzed on Polymor- phism with the help of 25 couples of SSR primers distributed in 12 pairs of chromo- somes. [Result] Gene fragments of O. rufipogon Griff. were found penetrated in the 25 microsatellite sites and most of the groups kept the parents of Xieqinzao B or DNA sequence of O. rufipogon Griff. The average rate of recurrent homozygous bands was 78.13% in the ILs, but the highest was 94.98% (amplified by primer RM131) and the lowest was 60.25% (RM171). The average rate of donor homozy- gous bands was 13.37%, but the highest was 32.64% (RM171) and the lowest was 2.93% (RM1095). There were numerous heterozygous sites in the population and the average heterozygosis rate was 5.62%, while the highest was 10.04%(RM401). Moreover, we found some parental fragments were lost and some novel fragments were not detected in either parent in BC1F6 population. The average rate of lost bands was 2.88%, while the highest was 13.39% (RM311) and the lowest was 0 (RM401). The average rate of new bands was 1%. The average of Nei's gene di- versity (He) and Shannon's Information index (I) were 0.276 and 0.457 respectively in high generation of introgression lines. [Conclusion] The study demonstrated that distant hybridization led to extensive genetic and epigenetic variations in high gener- ation of introgression lines, which expanded the base of genetic variation and laid an important foundation for rice improvement and germplasm innovation.

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期刊信息
  • 《安徽农业科学》
  • 北大核心期刊(2008版)
  • 主管单位:安徽省农业科学院
  • 主办单位:安徽省农业科学院
  • 主编:曹淑华
  • 地址:合肥市庐阳区农科南路40号
  • 邮编:230031
  • 邮箱:ahnykx@163.com
  • 电话:0551-65148869 65160973
  • 国际标准刊号:ISSN:0517-6611
  • 国内统一刊号:ISSN:34-1076/S
  • 邮发代号:26-20
  • 获奖情况:
  • 1995年获安徽省优秀期刊三等奖,1998年获安徽省优秀期刊三等奖,2002年获第三届全国优秀农业期刊奖,2005年获第四届全国优秀农业期刊一等奖,2005年获安徽省优秀科技期刊一等奖,2006年获第五届全国农业期刊金犁奖学术类一等奖,第四届华东地区优秀期刊,2009年安徽省优秀期刊,RCCSE中国权威学术期刊(A+),中国农业核心期刊(2010)
  • 国内外数据库收录:
  • 美国化学文摘(网络版),日本日本科学技术振兴机构数据库,中国北大核心期刊(2004版),中国北大核心期刊(2008版)
  • 被引量:163721