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Genome Size of Alexandrium catenella and Gracilariopsis lemaneiformis Estimated by Flow Cytometry
  • ISSN号:1672-5182
  • 期刊名称:《中国海洋大学学报:英文版》
  • 分类:P[天文地球]
  • 作者机构:[1]Key Laboratory of Marine Genetics andBreeding of Ministry of Education of China, College of Marine LifeSciences, Ocean University of China, Qingdao 266003, P. R. China, [2]Department of Microbiology, Hazara University Mansehra, KPK, Pakistan
  • 相关基金:supported by the National Natural Science Foundation of China (Nos.41176098 and 31372529)
中文摘要:

Flow cytometry(FCM) technique has been widely applied to estimating the genome size of various higher plants. However, there is few report about its application in algae. In this study, an optimized procedure of FCM was exploited to estimate the genome size of two eukaryotic algae. For analyzing Alexandrium catenella, an important red tide species, the whole cell instead of isolated nucleus was studied, and chicken erythrocytes were used as an internal reference. The genome size of A. catenella was estimated to be 56.48 ± 4.14 Gb(1C), approximately nineteen times larger than that of human genome. For analyzing Gracilariopsis lemaneiformis, an important economical red alga, the purified nucleus was employed, and Arabidopsis thaliana and Chondrus crispus were used as internal references, respectively. The genome size of Gp. lemaneiformis was 97.35 ± 2.58 Mb(1C) and 112.73 ± 14.00 Mb(1C), respectively, depending on the different internal references. The results of this research will promote the related studies on the genomics and evolution of these two species.

英文摘要:

Flow cytometry(FCM) technique has been widely applied to estimating the genome size of various higher plants. However, there is few report about its application in algae. In this study, an optimized procedure of FCM was exploited to estimate the genome size of two eukaryotic algae. For analyzing Alexandrium catenella, an important red tide species, the whole cell instead of isolated nucleus was studied, and chicken erythrocytes were used as an internal reference. The genome size of A. catenella was estimated to be 56.48 ± 4.14 Gb(1C), approximately nineteen times larger than that of human genome. For analyzing Gracilariopsis lemaneiformis, an important economical red alga, the purified nucleus was employed, and Arabidopsis thaliana and Chondrus crispus were used as internal references, respectively. The genome size of Gp. lemaneiformis was 97.35 ± 2.58 Mb(1C) and 112.73 ± 14.00 Mb(1C), respectively, depending on the different internal references. The results of this research will promote the related studies on the genomics and evolution of these two species.

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期刊信息
  • 《中国海洋大学学报:英文版》
  • 中国科技核心期刊
  • 主管单位:教育部
  • 主办单位:中国海洋大学
  • 主编:文圣常
  • 地址:青岛市松岭路238号
  • 邮编:266100
  • 邮箱:xbywb@ouc.edu.cn
  • 电话:0532-66782408
  • 国际标准刊号:ISSN:1672-5182
  • 国内统一刊号:ISSN:37-1415/P
  • 邮发代号:24-89
  • 获奖情况:
  • 被美国化学文摘(CA)和美国剑桥科学文摘(CSA)收录
  • 国内外数据库收录:
  • 俄罗斯文摘杂志,美国化学文摘(网络版),英国农业与生物科学研究中心文摘,荷兰文摘与引文数据库,美国剑桥科学文摘,美国科学引文索引(扩展库),美国生物科学数据库,英国动物学记录,中国中国科技核心期刊
  • 被引量:123