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A proteomics study of auxin effects in Arabidopsis thaliana
  • ISSN号:1672-9145
  • 期刊名称:Acta Biochimica et Biophysica Sinica
  • 时间:2012.9.9
  • 页码:783-796
  • 分类:Q51[生物学—生物化学] X173[环境科学与工程—环境科学]
  • 作者机构:[1]National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences Chinese Academy of Sciences, 200032 Shanghai, China
  • 相关基金:The work was supported by grants from the National Natural Science Foundation of China (No. 90717001) and the Shanghai Science and Technology Development Fund (No. 2008XD14049).
  • 相关项目:生长素和油菜素内酯的互作机制及其调控光形态建成的机理研究
中文摘要:

许多植物激素通过 modulating 蛋白质降级调整植物生长和开发。在这研究, proteome 研究基于多维的非胶化猎枪途径被执行经由 Arabidopsis thaliana 的 ubiquitin-proteasome 小径分析导致植物生长素的蛋白质降级,与学习在植物生长素处理以后的全面蛋白质变化的强调(1 nM 或 1 湯愠楢楬祴。

英文摘要:

Many phytohormones regulate plant growth and development through modulating protein degradation. In this study, a proteome study based on multidimensional non-gel shotgun approach was performed to analyze the auxin-induced protein degradation via ubiquitinproteasome pathway of Arabidopsis thaliana, with the emphasis to study the overall protein changes after auxin treatment (1 nM or 1 μM indole-3-acetic acid for 6, 12, or 24 h). More than a thousand proteins were detected by using label-free shotgun method, and 386 increased proteins and 370 decreased ones were identified after indole-3-acetic acid treatment. By using the auxin recep- tor-deficient mutant, tirl-1, as control, comparative analysis revealed that 69 and 79 proteins were significantly decreased and increased, respectively. Detailed analysis showed that among the altered proteins, some were previously reported to be associated with auxin regulation and others are potentially involved in mediating the auxin effects on specific cellular and physiological processes by regulating photosynthesis, chloroplast development, cyto-skeleton, and intracellular signaling. Our results demonstrated that label-free shotgun proteomics is a powerful tool for large-scale protein identification and the analysis of the proteomic profiling of auxin-regulated biological processes will provide informative clues of underlying mechanisms of auxin effects. These results will help to expand the understanding of how auxin regulates plant growth and development via protein degradation.

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期刊信息
  • 《生物化学与生物物理学报:英文版》
  • 北大核心期刊(2004版)
  • 主管单位:
  • 主办单位:中国科学院上海生物化学研究所
  • 主编:
  • 地址:上海岳阳路319号
  • 邮编:200031
  • 邮箱:abbs@sibs.ac.cn
  • 电话:021-54920956 54920955
  • 国际标准刊号:ISSN:1672-9145
  • 国内统一刊号:ISSN:31-1940/Q
  • 邮发代号:4-210
  • 获奖情况:
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,荷兰文摘与引文数据库,美国生物医学检索系统,美国剑桥科学文摘,美国科学引文索引(扩展库),美国生物科学数据库,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),英国英国皇家化学学会文摘,中国北大核心期刊(2000版)
  • 被引量:5851