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A de novo Genome of a Chinese Radish Cultivar
  • ISSN号:1009-8526
  • 期刊名称:《广州航海学院学报》
  • 时间:0
  • 分类:S631.1[农业科学—蔬菜学;农业科学—园艺学]
  • 作者机构:Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops of Ministry of Agriculture, The Beijing Genomics Institute, Institute of Economic Crop, Hubei Academy of Agricultural Sciences
  • 相关基金:supported by grants from the Ministry of Science and Technology of the People’s Republic of China(2013BAD01B04;2012BAD02B01;2012FY110203;and 2012AA021801-4);the Ministry of Agriculture of the People’s Republic of China(2014NW B032);the Outstanding Talents Program and Innovation Program(Vegetable Germplasm Resources Team,CAAS-ASTIP-2013-IVFCAAS)of the Chinese Academy of Agricultural Sciences;the Core Research Budget of the Non-profit Governmental Research Institution(2012ZL024);the 973 Program(2012CB113900;2013CB127000);the 863 Program(2012AA100101);the National Natural Science Foundation of China(NSFC grant 31301771)
中文摘要:

Here, we report a high-quality draft genome of a Chinese radish(Raphanus sativus) cultivar. This draft contains 387.73 Mb of assembled scaffolds, 83.93% of the scaffolds were anchored onto nine pseudochromosomes and 95.09% of 43 240 protein-coding genes were functionally annotated. 184.75 Mb(47.65%) of repeat sequences was identified in the assembled genome. By comparative analyses of the radish genome against 10 other plant genomes, 2 275 genes in 780 gene families were found unique to R. sativus. This genome is a good reference for genomic study and of great value for genetic improvement of radish.

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期刊信息
  • 《广州航海学院学报》
  • 主管单位:广东省教育厅
  • 主办单位:广州航海学院
  • 主编:王玉潜
  • 地址:广州黄埔区红山三路101号
  • 邮编:510725
  • 邮箱:xuebao@gzhmt.edu.cn
  • 电话:020-32083014
  • 国际标准刊号:ISSN:1009-8526
  • 国内统一刊号:ISSN:44-1448/U
  • 邮发代号:
  • 获奖情况:
  • 全国高职高专优秀学报,中国高校特色科技期刊
  • 国内外数据库收录:
  • 被引量:17