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苎麻线粒体基因CoxⅡ和atpA与细胞质雄性不育相关性分析
  • ISSN号:0578-1752
  • 期刊名称:《中国农业科学》
  • 时间:0
  • 分类:S565.4[农业科学—作物学] S816.2[农业科学—饲料科学;农业科学—畜牧学;农业科学—畜牧兽医]
  • 作者机构:[1]云南大学植物改良与应用实验室,昆明650091
  • 相关基金:基金项目:国家自然科学基金(30360058)
中文摘要:

【目的】探讨线粒体CoxⅡ和atpA基因与苎麻CMS的关系。【方法】根据GenBank报道的双子叶植物线粒体CoxⅡ和atpA基因编码区高度保守序列设计简并引物,通过PCR技术从苎麻细胞质雄性不育系、保持系和恢复系(简称“三系”)mtDNA中扩增目的基因片段;采用DNAWalking策略从3′端和5′端扩增基因片段的未知侧翼序列,分离完整的线粒体CoxⅡ、atpA基因;基于全基因序列和基因表达(RT-PCR法)分析这两个基因在苎麻“三系”间的差异。【结果】分离的苎麻CoxⅡ和atpA基因片段与GenBank中一些双子叶植物同类基因的同源性分别高达95%和97%以上,获得的CoxⅡ、atpA全基因包含了完整的开放阅读框。“三系”的CoxⅡ基因在mtDNA水平、转录水平、蛋白质水平上均无明显差异。雄性不育系atpA基因在mtDNA水平、氨基酸序列和蛋白质二级结构上与保持系和恢复系存在比较明显的差异;RT-PCR分析还表明,不育系atpA基因在现蕾期和开花后期的表达量明显低于可育系。【结论】CoxⅡ基因与苎麻CMS可能无关,而不育系atpA基因的序列变异和/或异常表达可能与苎麻CMS关系密切。

英文摘要:

[Objective] This study aimed at probing into the correlation of mitochondrial genes CoxⅡ and atpA with the cytoplasmic male sterility (CMS) in ramie [Boehmeria nivea (L.) Gaud,]. [Method] The CMS related CoxⅡ and aptA gene fragments were cloned from the mitochondrial DNA of ramie CMS line and its maintainer and restorer lines (fertile lines) by using PCR and degenerated primer strategy. The primers were designed according to the reserved sequences in the encoding region of mitochondrial genes CoxⅡ and atpA of some dicotyledons from GenBank. The complete CoxⅡ and atpA genes were obtained by means of amplifying the 3′ and 5′ end unknown sequences of these gene fragments using DNA Walking method. Based on the complete gene sequences and gene expression patterns (RT-PCR), the differences of these two genes between ramie CMS line and the fertile lines were analyzed. [Result] The amplified CoxⅡ and atpA gene fragments showed 95% and 97% homology with the analogous genes from some dicotyledons. The complete Cox Ⅱ and atpA genes each had an intact open reading frame. The Cox Ⅱ gene showed no difference between ramie CMS line and fertile lines at the levels of mtDNA sequence, transcription and protein. However, compared to the fertile lines, atpA gene from CMS line showed obvious difference at the levels of mtDNA, amino acid sequence and the secondary structure of protein. And an abnormal low expression of atpA gene in CMS line at the budding stage and late-blooming stage was revealed by RT-PCR analysis. [Conclusion] The correlation of Cox Ⅱ gene with ramie CMS could be excluded, but the result suggested a close relationship of ramie CMS with the variation in DNA sequence and / or abnormality in expression of atpA gene in CMS line.

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期刊信息
  • 《中国农业科学》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国农业部
  • 主办单位:中国农业科学院 中国农学会
  • 主编:万建民
  • 地址:北京中关村南大街12号中国农业科学院图书馆楼4101-4103室
  • 邮编:100081
  • 邮箱:zgnykx@caas.cn
  • 电话:010-82109808 82106279
  • 国际标准刊号:ISSN:0578-1752
  • 国内统一刊号:ISSN:11-1328/S
  • 邮发代号:2-138
  • 获奖情况:
  • 中国期刊方阵“双高”期刊,第三届中国出版政府奖提名奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘,中国北大核心期刊(2000版)
  • 被引量:85620