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海州香薷不同种群细胞壁转化酶蛋白结构与分子模拟对接
  • ISSN号:0439-8114
  • 期刊名称:《湖北农业科学》
  • 时间:0
  • 分类:Q51[生物学—生物化学] Q942.7[生物学—植物学]
  • 作者机构:[1]遵义师范学院资源与环境学院,贵州遵义563002, [2]武汉大学资源与环境科学学院,武汉430079
  • 相关基金:国家自然科学基金项目(21477093;31270432); 遵义师范学院博士基金项目(遵师BS[2014]20号)
中文摘要:

为研究铜胁迫下海州香薷(Elsholtzia haichowensis Sun)非矿区种群细胞壁转化酶(Eh Ncw INV)和矿区种群细胞壁转化酶(Eh Ccw INV)活性差异的机理,运用在线分析工具对细胞壁转化酶基因推导的氨基酸序列进行分析,利用SWISS-MODEL进行同源建模,并将细胞壁转化酶与蔗糖分子进行模拟对接。结果表明,海州香薷两个种群细胞壁转化酶蛋白质在443位点和538位点处存在氨基酸趋异位点,模拟的3D结构非常相似,仅在趋异位点Leu433/Pro433和Tyr538/His538处有差别。Eh Ncw INV、Eh Ccw INV和模拟突变体(Eh Ncw INV-L433P和Eh Ncw INV-Y538H)与蔗糖分子对接形成的催化活性中心构象基本一致,但在空间位置上存在细微差异,氨基酸趋异可能是造成两个种群细胞壁转化酶活性差异的原因之一。

英文摘要:

It was to study the mechanism of enzyme activity difference of cell wall invertase from different populations,one from non-mine population(Eh Ncw INV),the other from mine population(Eh Ccw INV) in Elsholtzia haichowensis Sun under copper stress. The amino acid sequences of cell wall invertase were analyzed by Ex PASy(http://au.expasy.org/tools/). The threedimensional structure was constructed by homologous modeling. The structures of cell wall invertase from two populations of E.haichowensis Sun and non-mine population with each single point mutation in complex with sucrose were simulated. The results showed that there were two divergent amino acids at position 443 and 538 between Eh Ncw INV and Eh Ccw INV. The threedimensional structures were exactly similar between Eh Ncw INV and Eh Ccw INV. It showed difference at Leu433/Pro433 and Tyr538/His538,which were divergent sites. The structures of catalytic active center of Eh Ncw INV,Eh Ccw INV,and simulated mutants(Eh Ncw INV-L433 P,Eh Ncw INV-Y538H) binding with sucrose showed no significant differences. However,there were differences on spatial position. It might be one of the reasons for the difference of cell wall invertase activity between two populations.

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期刊信息
  • 《湖北农业科学》
  • 北大核心期刊(2011版)
  • 主管单位:湖北省农业科学院
  • 主办单位:湖北省农业科学院 华中农业大学 长江大学
  • 主编:焦春海
  • 地址:武汉市武昌南湖瑶苑1号省农业科学院内
  • 邮编:430064
  • 邮箱:hbnykxxzz@126.com
  • 电话:027-87389334
  • 国际标准刊号:ISSN:0439-8114
  • 国内统一刊号:ISSN:42-1255/S
  • 邮发代号:38-21
  • 获奖情况:
  • 国家期刊奖,全国农业核心期刊,湖北省优秀期刊,中国期刊方阵“双高”期刊
  • 国内外数据库收录:
  • 日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2000版)
  • 被引量:30537