位置:成果数据库 > 期刊 > 期刊详情页
萝卜-芥蓝异源四倍体植物SR30基因转录本的选择性剪接分析
  • ISSN号:1005-3395
  • 期刊名称:《热带亚热带植物学报》
  • 时间:0
  • 分类:Q943[生物学—植物学]
  • 作者机构:武汉大学生命科学学院,武汉430072
  • 相关基金:国家自然科学基金项目(31370258)资助.致谢感谢华中农业大学吴江生教授提供珍贵的试验材料.
中文摘要:

为了解异源多倍体形成后,其剪接因子基因SR30在各组织器官间的表达量以及选择性剪接模式与亲本的差异,选取萝卜-芥蓝异源四倍体(Raphanobrassica)及其亲本萝卜(Raphanus sativus)、芥蓝(Brassica oleracea var.alboglabra)为材料,运用RACE-PCR方法克隆到全长的编码序列(CDS)和3非编码区(3 UTR),运用q RT-PCR和半定量RT-PCR检测其在各组织器官中的表达量和各转录本表达量间的差异。结果表明,四倍体中萝卜同源的Rs SR30基因有5种转录本,芥蓝同源的Bo SR30基因有4种转录本。同时,SR30在3物种中的表达具有组织器官的差异,且在四倍体中的总体表达量显著低于亲本。根据克隆到的转录本,预测Rs SR30编码3种蛋白,Bo SR30编码2种,不同蛋白异构体的区别体现在C末端的丝氨酸-精氨酸富集(RS)结构域。因此,萝卜-芥蓝异源多倍体形成后,SR30基因在表达量和转录本选择性剪接方面都发生了改变。

英文摘要:

In order to understand the difference between allopolyploid and its parents in expression level and alternative splicing pattern of SR30 gene when the allopolyploid had been synthesized, different tissues or organs were collected from allotetraploid plant Raphanobrassica and its maternal parent Raphanus sativus, paternal parent Brassica oleracea var. alboglabra. Full-length coding sequence(CDS) and 3 untranslated regions(3 UTR) were cloned by using RACE-PCR. The expression level based on q RT-PCR and relative expression of each m RNA isoforms by using semi-quantitative RT-PCR was detected. The results showed that there were 5 m RNA isoforms of Rs SR30 and 4 m RNA isoforms of Bo SR30 appeared in the allopolyploid. In addition, the expression of SR30 reflected an obvious diversity between different tissues or organs. The expression of SR30 reduced significantly in allopolyploid compared with its parental species. Based on the m RNAs, it was predicted that there are 3 proteins encoded by Rs SR30 and 2 proteins encoded by Bo SR30. The difference between each protein isoforms was reflected in the RS(rich in serine-arginine dipeptides) domains located in C-terminal. Therefore, both of expression and alternative splicing patterns of SR30 changed when the allopolyploid had been synthesized.

同期刊论文项目
同项目期刊论文
期刊信息
  • 《热带亚热带植物学报》
  • 北大核心期刊(2011版)
  • 主管单位:中国科学院
  • 主办单位:中国科学院华南植物园 广东省植物学会
  • 主编:黄宏文
  • 地址:广州市天河区兴科路723号中国科学院华南植物园行政办公楼2楼
  • 邮编:510650
  • 邮箱:jtsb@scib.ac.cn
  • 电话:020-37252514
  • 国际标准刊号:ISSN:1005-3395
  • 国内统一刊号:ISSN:44-1374/Q
  • 邮发代号:
  • 获奖情况:
  • 中文核心期刊,广东省优秀科技期刊,执行《CD-CAJ》规范奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,美国生物科学数据库,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:11360