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一个棉花β-1,3-葡聚糖酶基因全长cDNA的克隆与特征分析
  • ISSN号:0496-3490
  • 期刊名称:《作物学报》
  • 时间:0
  • 分类:S565.4[农业科学—作物学]
  • 作者机构:[1]南京农业大学作物遗传与种质创新国家重点实验室,江苏南京210095
  • 相关基金:国家自然科学基金项目(30270806,30370899);教育部长江学者和创新团队发展计划项目(IRTD0432)
中文摘要:

利用本实验室分离的防卫基因类似物片段,通过5′和3′RACE,从海岛棉海7124中克隆了一个β-1,3-葡聚糖酶基因全长cDNA,命名为GbGLU。其全长1266bp,含一个编码361个氨基酸残基的开放阅读框。该基因编码产物理论分子量和等电点为MW:39.66kD,pI=9.15,含有糖基水解酶家族17的保守结构域,N端有26个氨基酸残基组成的信号肽。Southem结果显示,GbCLU在棉花基因组中以单拷贝形式存在,研究发现,GbGLU的表达受黄萎病菌的诱导。聚类分析表明,棉花葡聚糖酶基因可分为3类,分别含有糖基水解酶家族3、9、17的保守结构域。无论棉花中的还是本研究中参考的其他作物中,受病菌诱导的葡聚糖酶基因都含有糖基水解酶家族17的保守结构域,故推断其为此类基因参与抗病反应的功能域。

英文摘要:

β-1,3-glucanase genes are involved in diverse physiological and developmental processes, including microsporogenesis, pollen germination, fertilization, seed germination, and defense against pathogens. β-1,3-glucanase genes related to plant resistance are the members of a large family of proteins collectively referred to as the pathogenesisrelated (PR) proteins. Several β-1,3-glucanase genes have been cloned from cotton, but the majority of them are involved in fiber development and are independent of resistance. Based on the nucleotide sequence which was isolated previously by our laboratory, we cloned one full length cDNA of β-1,3-glucanase gene (GbGLU) from Hai7124 by RACE method. DNA sequence analyses showed that the size of cDNA cloned was 1 266 bp, and it included an open reading frame of 1 086 bp that eno3ded a polypeptide of 361 amino acids residues with the calculated MW of 39.66 kD and the predicted pl of 9.15. The deduced amino acid sequence of GbGLU contains conserved domain of Glycosyl hydrolases family 17 and has the Nterminal signal peptide composed of 26 animo acids residues. Southern-blot analysis indicated that there is single copy of GbCLU within cotton genome. The expression analysis of GbCLU gene in cotton root infected by Verticillura dahliae strain VD8 showed that its expression was detectable at 48 h and 96 h after inoculation. Glucanase genes cloned from cotton could be divided into three classes according to phylogenetic analysis and possess conserved motif of glycosyl hydrolases family 3, 9, and 17, respectively. In addition, we find that glucanase related with resistance response from cotton and other plants possesses the motif of glycosyl hydrolases family 17. And therefore, we suggest that conserved motif of glycosyl hydrolases family 17 might be the function motif contributing to resistance response.

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期刊信息
  • 《作物学报》
  • 北大核心期刊(2011版)
  • 主管单位:中国科学技术协会
  • 主办单位:中国作物学会 中国农业科学院作物科学研究所
  • 主编:万建民
  • 地址:北京海淀区中关村南大街12号中国农业科学院
  • 邮编:100081
  • 邮箱:zwxb301@caas.cn
  • 电话:010-82108548
  • 国际标准刊号:ISSN:0496-3490
  • 国内统一刊号:ISSN:11-1809/S
  • 邮发代号:82-336
  • 获奖情况:
  • 2002年-第三届中国科协优秀科技期刊二等奖,2002-2009年-百种中国杰出学术期刊,2004年获“全国优秀期刊一等奖”,2005年获第三届国家期刊奖提名奖,2009年评为“2008年度中国精品科技期刊”,2009年被评为“新中国60年有影响力的期刊”,2011年获"第二届中国出版政府奖期刊奖提名奖"
  • 国内外数据库收录:
  • 俄罗斯文摘杂志,美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,美国剑桥科学文摘,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘,中国北大核心期刊(2000版)
  • 被引量:49369