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Molecular phylogeny and (Teleostei: Scombridae) based evolution of Scomber on mitochondrial and nuclear DNA sequences
  • ISSN号:0254-4059
  • 期刊名称:《中国海洋湖沼学报:英文版》
  • 时间:0
  • 分类:Q959.468[生物学—动物学] Q949.32[生物学—植物学]
  • 作者机构:[1]Ocean University of China, Qingdao 266003, China, [2]Zhejiang Ocean University, Zhoushan 316000, China, [3]National Research Institute of Far Seas Fisheries, Yokohama 236-8648, Japan
  • 相关基金:Supported by the International Cooperation and Exchange of the National Natural Science Foundation of China (No. 31061160187), and Special Fund for Agro-scientific Research in the Public Interest (No. 200903005)
中文摘要:

A molecular phylogenetic analysis of the genus Scomber was conducted based on mitochondrial(COI,Cyt b and control region) and nuclear(5S rDNA) DNA sequence data in multigene perspective.A variety of phylogenetic analytic methods were used to clarify the current taxonomic classification and to assess phylogenetic relationships and the evolutionary history of this genus.The present study produced a well-resolved phylogeny that strongly supported the monophyly of Scomber.We confirmed that S.japonicus and S.colias were genetically distinct.Although morphologically and ecologically similar to S.colias,the molecular data showed that S.japonicus has a greater molecular affinity with S.australasicus,which conflicts with the traditional taxonomy.This phylogenetic pattern was corroborated by the mtDNA data,but incompletely by the nuclear DNA data.Phylogenetic concordance between the mitochondrial and nuclear DNA regions for the basal nodes supports an Atlantic origin for Scomber.The present-day geographic ranges of the species were compared with the resultant molecular phylogeny derived from partition Bayesian analyses of the combined data sets to evaluate possible dispersal routes of the genus.The present-day geographic distribution of Scomber species might be best ascribed to multiple dispersal events.In addition,our results suggest that phylogenies derived from multiple genes and long sequences exhibited improved phylogenetic resolution,from which we conclude that the phylogenetic reconstruction is a reliable representation of the evolutionary history of Scomber.

英文摘要:

A molecular phylogenetic analysis of the genus Scomber was conducted based on mitochondrial (COI, Cyt b and control region) and nuclear (5S rDNA) DNA sequence data in multigene perspective. A variety of phylogenetic analytic methods were used to clarify the current taxonomic classification and to assess phylogenetic relationships and the evolutionary history of this genus. The present study produced a well-resolved phylogeny that strongly supported the monophyly of Scomber. We confirmed that S. japonicus and S. colias were genetically distinct. Although morphologically and ecologically similar to S. colias, the molecular data showed that S. japonicus has a greater molecular affinity with S. australasicus, which conflicts with the traditional taxonomy. This phylogenetic pattern was corroborated by the mtDNA data, but incompletely by the nuclear DNA data. Phylogenetic concordance between the mitochondrial and nuclear DNA regions for the basal nodes supports an Atlantic origin for Scomber. The present-day geographic ranges of the species were compared with the resultant molecular phylogeny derived from partition Bayesian analyses of the combined data sets to evaluate possible dispersal routes of the genus. The present-day geographic distribution of Scomber species might be best ascribed to multiple dispersal events. In addition, our results suggest that phylogenies derived from multiple genes and long sequences exhibited improved phylogenetic resolution, from which we conclude that the phylogenetic reconstruction is a reliable representation of the evolutionary history of Scomber.

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期刊信息
  • 《中国海洋湖沼学报:英文版》
  • 中国科技核心期刊
  • 主管单位:中国科学院 中国科协
  • 主办单位:中国海洋与湖沼学会
  • 主编:曾呈奎
  • 地址:中国青岛南海路7号
  • 邮编:266071
  • 邮箱:cjol@ms.qdio.ac.cn
  • 电话:0532-82898754
  • 国际标准刊号:ISSN:0254-4059
  • 国内统一刊号:ISSN:37-1150/P
  • 邮发代号:2-581
  • 获奖情况:
  • 第一、二届全国优秀科技期刊二等奖,中科院优秀期刊二等奖
  • 国内外数据库收录:
  • 俄罗斯文摘杂志,美国化学文摘(网络版),英国农业与生物科学研究中心文摘,荷兰文摘与引文数据库,美国地质文献预评数据库,美国剑桥科学文摘,美国科学引文索引(扩展库),美国生物科学数据库,英国科学文摘数据库,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊
  • 被引量:349