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基于四个线粒体基因片段的银鱼科鱼类系统发育
  • ISSN号:1000-3207
  • 期刊名称:水生生物学报
  • 时间:0
  • 页码:449-459
  • 分类:Q349.1[生物学—遗传学]
  • 作者机构:[1]复旦大学生物多样性科学研究所,生物多样性与生态工程教育部重点实验室,上海200433, [2]首都师范大学生命科学学院,北京100037
  • 相关基金:国家重点基础研究发展计划项目(2009CB421103); 国家自然科学基金(30970338); 上海市教育委员会科研创新项目(09ZZ02)资助
  • 相关项目:胡瓜鱼目鱼类反赤道分布与多样性纬度变异格局的成因
中文摘要:

银鱼科鱼类是我国重要的经济鱼类,但其属间系统发育关系与属、种的界定尚存争议。研究使用线粒体12S/16S核糖体RNA、细胞色素c氧化酶亚基Ⅰ(COⅠ)基因部分序列以及NADH脱氢酶亚基1全长序列重建银鱼科属间的系统发育。结果显示银鱼科鱼类是单系群,白肌银鱼属在银鱼系统发育的基部,“大银鱼属+新银鱼属”、“间银鱼属+银鱼属”形成两个单系亚群,但日本银鱼属的位置没有很好解决。基于COI基因序列计算的"短吻-陈氏-太湖-近太湖新银鱼复合群"种间遗传距离为0-0.19%、“乔氏-寡齿新银鱼复合群”种间遗传距离为0%。整合研究结果与前人形态、分子证据,详细地讨论了银鱼的属、种分类。

英文摘要:

Noodle-fishes(Osmeriformes: Salangidae) are important commercial fishery species in China and other Asian countries.Although these species are common in fresh water,estuarine and coastal habitats in East Asia,the phylogenetic relationships of noodle-fishes are still unresolved and the taxonomy at the genus or species level has been disputed.To elucidate the genus-level phylogenetic relationships of salangid fishes,partial sequences of mitochondrial 12S/16S ribosome RNA and cytochrome c oxidase subunit Ⅰ(COⅠ) genes and complete sequences of NADH dehy-drogenase subunit 1 gene were used in this present study.Phylogenetic relationships were constructed based on the combined data set of these 4 genes with 2464 bp after alignment,among which 788 sites were variable,and 723 sites were informative.Maximum Likelyhood and Bayesian methods were employed for phylogenetics analysis.Maximum Likelyhood and Bayesian analyses yielded same topology of trees.Results showed that the salangids was a mono-phyletic group.The genus Leucosoma occupied a basal position of the reconstructed Salangidae phylogeny.Two mo-nophyletic subgroups,‘Protosalanx + Neosalanx’ and ‘Hemisalanx + Salanx’ were also revealed.Within ‘Protosalanx + Neosalanx’ subgroup,three primitive lineage were found:(1) Protosalanx chinensis and Neosalanx anderssoni;(2) ‘N.brevirostris-tangkahkeii-taihuensis-pseudotaihuensis complex’;(3) ‘N.jordani-oligodontis complex’.The inter-specific phylogenetic relationships within ‘N.brevirostris-tangkahkeii-taihuensis-pseudotaihuensis complex’ and ‘N.jordani-oligodontis complex’ couldn’t be clarified on the phylogeny tree.Moreover,inter-specific genetic distances were 0—0.19% for ‘N.brevirostris-tangkahkeii-taihuensis-pseudotaihuensis complex’ and 0% for ‘N.jordani-oligodontis com-plex’ based on partial sequences of mitochondrial COⅠgene.Within ‘Hemisalanx + Salanx’ subgroup,Hemisalanx brachyrostralis and Salanx cuvieri were sister groups,and these t

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期刊信息
  • 《水生生物学报》
  • 北大核心期刊(2011版)
  • 主管单位:中国科学院
  • 主办单位:中科院水生所
  • 主编:桂建芳
  • 地址:武昌东湖南路7号中科院水生所
  • 邮编:430072
  • 邮箱:Acta@ihb.ac.cn
  • 电话:027-68780701
  • 国际标准刊号:ISSN:1000-3207
  • 国内统一刊号:ISSN:42-1230/Q
  • 邮发代号:82-329
  • 获奖情况:
  • 湖北省十佳重点期刊,中国农学会中国水产学会优秀科技期刊一等奖,中国科学院优秀期刊三等奖,中国期刊方阵“双效”期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,美国生物科学数据库,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:21674