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三种分子检测体系的比较及柑橘果园黄龙病监测
  • ISSN号:0577-7518
  • 期刊名称:《植物保护学报》
  • 时间:0
  • 分类:S641.303.6[农业科学—蔬菜学;农业科学—园艺学]
  • 作者机构:[1]重庆大学生物工程学院基因工程研究中心,重庆400030
  • 相关基金:国家自然科学基金(30971875),国家公益性行业(农业)科研专项(201003067)
中文摘要:

为了评价3种PCR分子检测体系对柑橘黄龙病(citrus huanglongbing,HLB)大田诊断效果,综合比较了常规PCR、巢式PCR和SYBRGreenI荧光定量PCR(SGI—qPCR)方法对柑橘黄龙病菌检测的灵敏度、特异性和准确度等参数,并用SYBRGreenI荧光定量PCR和巢式PCR监测广西柑橘园疑似HLB样品425个,比较了2种检测体系的阳性检出率。基于CQULA04F/CQULA04R引物对的SYBRGreenI荧光定量PCR的灵敏度可达10ag/μL;而巢式PCR灵敏度为100ag/μL,巢式PCR较常规PCR检测灵敏度高10^4倍。疑似样品的HLB病原SYBRGreenI荧光定量PCR和巢式PCR检出率分别为46.6%、40.0%。各检测体系的灵敏性、特异性、符合度依次为SYBRGreenI荧光定量PCR〉巢式PCR〉常规PCR。研究表明,SYBRGreenI荧光定量PCR可作为果园大规模HLB早期诊断和监测的首选,而在缺乏定量检测仪器时,巢式PCR也可用于HLB的检测.但需注意避免空气污染导致的假阳性。

英文摘要:

In order to provide practical detection approach for early diagnosis and dynamic monitoring of citrus huanglongbing (HLB) pathogen. The sensitivity, specificity and accuracy of 3 type PCR approa- ches were compared. Total 425 suspected citrus samples with or without symptom of HLB from plantation of Hepu County, Guangxi were amplified and confirmed by nested-PCR and SYBR Green I -qPCR ( SG I -qPCR). The effectiveness and the positive rates of the two PCR were evaluated. The results showed that the detection sensitivity of SG I -qPCR for HLB pathogen DNA was 10 ag/μL, while was 100 ag/μL for nested-PCR. Conventional PCR detection sensitivity was 104 times lower than nested-PCR method. Positive rate percent of detection for suspected citrus samples were in 46.6% and 40.0% by SG I -qPCR and nested-PCR, respectively, which indicated that SG I -qPCR was able to provide more accurate diag- noses than nested-PCR. The sensitivity and veracity of conventional PCR, nested-PCR and SG I -qPCR system were enhancing in turn. Practically, SG I -qPCR should be concerned priority selection in large scale early diagnosis and dynamic monitoring in citrus plantation. As the PCR instrument of quantitative detection not available, nested-PCR could be used for better detection of HLB as long as well controllingof the air pollution of amplified procedure, in order to prevent the false positive amplification.

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期刊信息
  • 《植物保护学报》
  • 中国科技核心期刊
  • 主管单位:中国科学技术学会
  • 主办单位:中国植物保护协会
  • 主编:彩万志
  • 地址:北京圆明园西路中国农业大学植保学院
  • 邮编:100094
  • 邮箱:zbxb@cau.edu.cn
  • 电话:010-62732528
  • 国际标准刊号:ISSN:0577-7518
  • 国内统一刊号:ISSN:11-1983/S
  • 邮发代号:82-620
  • 获奖情况:
  • 曾获中国科协优秀期刊奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:14691