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A new ALF from Litopenaeus vannamei and its SNPs related to WSSV resistance
  • ISSN号:0254-4059
  • 期刊名称:《中国海洋湖沼学报:英文版》
  • 分类:Q987[生物学—遗传学;生物学—人类学] S968.22[农业科学—水产养殖;农业科学—水产科学]
  • 作者机构:[1]Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China, [2]University of Chinese Academy of Scienees, Beijing 100049, China, [3]National & Local Joint Engineering Laboratory of Ecological Mariculture, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China
  • 相关基金:Supported by the National High Technology Research and Development Program of China (863 Program) (Nos. 2012AA 1,0A404, 2012AA092205) and the General Program of National Natural Science Foundation of China (Nos. 31272683, 31072203) to Dr. LI Fuhua
中文摘要:

Anti-lipopolysaccharide 因素(ALF ) 是甲壳纲的动物免疫系统的基本部件对病原体的一个范围保卫。新 ALF 的 cDNA 顺序,指明的 nLvALF2,与编码 132 的一个开的读物框架,氨基酸被克隆。它的推出的氨基酸顺序包含了 ALF 的保存功能的领域, LPS 有约束力的领域(LBD ) 。它的 genomic 顺序由三 exons 和四 introns 组成了。nLvALF2 主要在 Oka 机关和虾的鳃被表示。nLvALF2 的 transcriptional 水平在白色后面显著地增加了点症候群病毒(WSSV ) 感染,在保护虾免受 WSSV 的伤害建议它的重要角色。单个核苷酸多型性(SNP ) 在 nLvALF2, 38 与虾的危险性 / 抵抗为协会被分析到 WSSV 的 genomic 顺序被发现。loci g.2422 A > G, g.2466 T > C,和 g.2529 G > A 显著地与抵抗被联系到 WSSV (P < 0.05 ) 。这些 SNP loci 能为 Litopenaeus vannamei 的 WSSV 抵抗的变化的选择作为标记被开发。

英文摘要:

Anti-lipopolysaccharide factors (ALFs) are basic components of the crustacean immune system that defend against a range of pathogens. The cDNA sequence of a new ALF, designated nLvALF2, with an open reading flame encoding 132 amino acids was cloned. Its deduced amino acid sequence contained the conserved functional domain of ALFs, the LPS binding domain (LBD). its genotnic sequence consisted of three exons and four introns, nLvALF2 was mainly expressed in the Oka organ and gills of shrimps. The transcriptional level of nLw4LF2 increased significantly after white spot syndrome virus (WSSV) infection, suggesting its important roles in protecting shrimps from WSSV. Single nucleotide polymorphisms (SNPs) were found in the genomic sequence of nLvALF2, of which 38 were analyzed for associations with the susceptibility/resistance of shrimps to WSSV. The loci g.2422 A〉G, g.2466 T〉C, and g.2529 G〉A were significantly associated with the resistance to WSSV (P〈0.05). These SNP loci could be developed as markers for selection of WSSV-resistant varieties ofLitopenaeus vannamei.

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期刊信息
  • 《中国海洋湖沼学报:英文版》
  • 中国科技核心期刊
  • 主管单位:中国科学院 中国科协
  • 主办单位:中国海洋与湖沼学会
  • 主编:曾呈奎
  • 地址:中国青岛南海路7号
  • 邮编:266071
  • 邮箱:cjol@ms.qdio.ac.cn
  • 电话:0532-82898754
  • 国际标准刊号:ISSN:0254-4059
  • 国内统一刊号:ISSN:37-1150/P
  • 邮发代号:2-581
  • 获奖情况:
  • 第一、二届全国优秀科技期刊二等奖,中科院优秀期刊二等奖
  • 国内外数据库收录:
  • 俄罗斯文摘杂志,美国化学文摘(网络版),英国农业与生物科学研究中心文摘,荷兰文摘与引文数据库,美国地质文献预评数据库,美国剑桥科学文摘,美国科学引文索引(扩展库),美国生物科学数据库,英国科学文摘数据库,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊
  • 被引量:349