应用Dynal磁珠一生物素标记的微卫星探针(AC)8,(AG)8和(ATG)12与文冠果基因组DNA酶切片段杂交,捕获含有微卫星序列的DNA片段,连接到pMD18-T载体上,转入感受态细胞Trans5ct,构建文冠果富集微卫星文库.利用M13F和M13R载体序列引物筛选文库,对插入片段长度为400~1500bp的克隆进行测序.共获得123条序列,55条(44.7%)舍有微卫星位点,其中完美型占63.7%,非完美型22.4%,混合型10.3%.微卫星重复基元中,二核苷酸(AC)n最为常见.
The DNA fractions containing microsatellite sequences were captured by hybridizating the digested Xanthoceras sorbifolia genomic DNA fragments with the oligonucleotide probes (AC) s, (AG) s and (ATG)12 attached to striptavadin coated magnetic beads (Dynal). The enriched DNA fragments were ligated into pMD18-T easy vector and then transformed into competent TransSα cell to form an en- riched microsatellite sequence library. PCR screening using MI3 Forward and M13 Reverse as primers identified 123 clones containing 400 to 1 500 bp inserts. Sequence analysis of these positive clones confirmed 55 microsateUite sequences, with an enrichment efficiency of 44.7%. Of these microsatel- lite loci, 63.7% were perfect repeat motif, 22.4% imperfect and 10.3 compound repeat motifs. A- mong them, (AC), was the most common motif.