根据NCBI上已经报道的hog1序列,利用简并引物在线设计工具CODEHOP设计出两对简并引物,通过巢式PCR扩增,得到一段大小为635 bp的基因片段,将其克隆到T载体上并测序,将测得的序列在NCBI的Blast搜索发现,其与已报道的其他一些物种的hog1基因有同源性.用CODEHOP程序化设计简并引物可信性强,阳性率高.该基因的成功克隆为研究杜氏盐藻的HOG信号途径奠定了基础.
According to the published sequence of hog1 from NCBI database, we designed the degenerate primers of hog1 using CODEHOP software. Using these degenerate primers, a partial hog1 cDNA of 635bp was amplified from Dunalilla salina and cloned into T vector. Sequence analysis showed that the cloned hog1 shares high sequence identity to those of hog1 from other species. The results indicated that the degenerate primers designed by the CODEHOP could be used to amplify specific gene fragment. Cloning of hog1 gene fragment would be helpful to further characterize the HOG signaling pathway of Dunalilla salina.