位置:成果数据库 > 期刊 > 期刊详情页
Modeling the intracellular dynamics for Vif-APO mediated HIV-1 virus infection
  • ISSN号:1674-1056
  • 期刊名称:《中国物理B:英文版》
  • 时间:0
  • 分类:S858.28[农业科学—临床兽医学;农业科学—兽医学;农业科学—畜牧兽医] Q513[生物学—生物化学]
  • 作者机构:[1]Center for Theoretical Biology, Peking University, Beijing 100871, China, [2]School of Physics, Peking University, Beijing 100871, China, [3]BNLMS, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, College of Chemistry and Molecular Engineering Peking University, Beijing 100871, China
  • 相关基金:This work was supported by the National Natural Science Foundation of China (10721403), National Basic Research Program of China (2009CB918500) and the National High-Technology Research & Development Program of China (2006AA020400).
中文摘要:

病毒的传染性因素(Vif ) 被发现为控制 HIV-1 病毒传染性必要。触发它的快降级在 APOBEC 家庭(APO ) 指向细胞的抗病毒的蛋白质并且禁止包装进初生的 virion 的 APO。在现在的学习,我们建议一个数学模型到份量上学习这些典型病毒主人相互作用的细胞内部的动力学。出版试验性的数据的四个集合与模拟结果相比认为模型正当。系统的参数敏感和不安分析证明与 APO 有关的参数对最新综合的 HIV-1 病毒的传染性关键。有趣地,我们发现病毒的结构蛋白质的合成率作呕,要求的数字每初生的 virion 被优化与模型参数的包装 APO,和大部分的最小的水平完成高 virion 生产在一个相对小的范围以内仅仅对病毒有益。而且,在与病毒的蛋白质有关的几个参数的次要的变化梭织,病毒的 RNA 合成的使活跃之物,被发现在合并 Vif 和 APO 上导致像开关的行为。这些调查结果可以为理解 HIV-1 病毒和它的潜伏的高变化率提供新卓见,以及帮助为治疗学的设计识别关键目标。

英文摘要:

The viral infectivity factor (Vif) was found to be essential for controlling HIV-1 virus infectivity. It targets cellular antiviral proteins in APOBEC family (APO) to trigger its fast degradation and inhibits APO packaging into nascent virion. In the present study, we propose a mathematical model to quantitatively study the intracellular dynamics of these typical virus-host interactions. Four sets of published experimental data were compared with simulation results to justify the model. Systematic parameter sensitivity and perturbation analysis showed that parameters related to APO are crucial to the infectivity of newly synthesized HIV-1 virus. Interestingly, we discovered that the synthesis rate of the viral structure protein Gag and the required number per nascent virion are optimized to achieve high virion production with minimal level of packaged APO, and large portion of model parameters are beneficial to virus only within a relatively small range. Furthermore, minor variations in several parameters related to viral protein Tat, the activator of viral RNA synthesis, were found to induce switch-like behaviors on both incorporated Vif and APO. These findings may provide new insights for understanding the high mutation rate of HIV-1 virus and its latency, as well as help identify key targets for therapeutic design.

同期刊论文项目
期刊论文 72
同项目期刊论文
期刊信息
  • 《中国物理B:英文版》
  • 中国科技核心期刊
  • 主管单位:中国科学院
  • 主办单位:中国物理学会和中国科学院物理研究所
  • 主编:欧阳钟灿
  • 地址:北京 中关村 中国科学院物理研究所内
  • 邮编:100080
  • 邮箱:
  • 电话:010-82649026 82649519
  • 国际标准刊号:ISSN:1674-1056
  • 国内统一刊号:ISSN:11-5639/O4
  • 邮发代号:
  • 获奖情况:
  • 国内外数据库收录:
  • 被引量:406