位置:成果数据库 > 期刊 > 期刊详情页
鲤鱼肝胰脏cDNA文库的表达序列标签分析及Lb—Fabp mRNA的特征
  • ISSN号:1000-3207
  • 期刊名称:《水生生物学报》
  • 时间:0
  • 分类:Q785[生物学—分子生物学]
  • 作者机构:[1]中山大学生命科学学院水生经济动物研究所、有害生物控制和资源利用国家重点实验室,广州510275
  • 相关基金:The National Basic Research Program (973 program, No. 2004CB117402); the National Natural Science Foundation of China (No. 30671626) ; the Guangdong Provincial Science and technology Program (No. 2006B36501006)
中文摘要:

本文构建了鲤鱼肝胰脏cDNA文库,共获得了1016条有效的表达序列标签。拼接组装成115个contigs和282个singletons。其中215个拼接序列在GenBank公共数据库中寻找到相对应的基因。对它们进行功能性分类和比较分析为鲤鱼肝胰脏的研究提供了基因表达信息的基础。文库中1016条表达序列标签有11条代表了鲤鱼肝基本型脂肪酸结合蛋白(Lb-Fabp)。通过序列比较我们获得了两个具有相同开放阅读框长度的Lb-Fabp cDNAs。开放阅读框全长381bp,编码126个氨基酸。半定量RT—PCR结合Southern blot技术研究了Lb-Fabp如mRNA在成鱼不同组织以及早期发育不同时期的表达图式。结果表明,Lb-Fabp mRNA在肝胰脏、中肠和后肠中表达量较高。同时在精巢和皮肤中有低水平的表达。脑、肌肉、卵巢、肾脏、脾脏、鳃和心脏等组织中其表达量更低。而在脂肪和前肠中则没有检测到Lb-Fabp mRNA表达。Lb-Fabp mRNA最早在胚体形成期检测到有低水平表达,随后的发育阶段中表达量逐渐升高。鲤鱼Lb-Fabp基因的表达图式提示在肝脏和肠等器官开始发育后,它可能在脂肪代谢中具有重要作用。

英文摘要:

A representative cDNA library obtained from hepatopancreas of common carp (Cyprinus carpio) was constructed, and 1016 expressed sequence tags were generated assembling into 115 contiguous sequences and 282 singletons. 215 (54.15%) of the assembled sequences were annotated based upon matching known genes in the GenBank public Databases. Functional categorization and comparative analyses of the sequence provided gene identities, expression information and a solid base for further research on common carp hepatopancreas. High expression of liver basic fatty acid binding protein (Lb-Fabp) (11/1016 ESTs) in the library was detected. Two types of Lb-Fabpa and Lb-Fabpb had an open reading frame of 381 bp encoding 126 amino acids, mRNA expression of Lb-Fabps in embryos, larva and adult common carp tissues were determined using semi-quantitative RT-PCR followed by Southern Blot analysis. Lb-Fabp mRNA was expressed with high levels in hepatopancreas, middle intestine and posterior intestine. Low levels of Lb-Fabp mRNA expression were observed in testis and skin, while much lower levels in muscle, brain, ovary, kidney, spleen, gill and heart. No Lb-Fabp mRNA expression was observed in fat and anterior intestine. Lb-Fabp mRNA was first observed in neurula stage, and expressed higher in the following stages. The expression pattern of Lb-Fabp mRNA suggests that common carp Lb-FABPs play an important role in lipid metabolism after the morphogenesis of hepatopancreas and intestine.

同期刊论文项目
同项目期刊论文
期刊信息
  • 《水生生物学报》
  • 北大核心期刊(2011版)
  • 主管单位:中国科学院
  • 主办单位:中科院水生所
  • 主编:桂建芳
  • 地址:武昌东湖南路7号中科院水生所
  • 邮编:430072
  • 邮箱:Acta@ihb.ac.cn
  • 电话:027-68780701
  • 国际标准刊号:ISSN:1000-3207
  • 国内统一刊号:ISSN:42-1230/Q
  • 邮发代号:82-329
  • 获奖情况:
  • 湖北省十佳重点期刊,中国农学会中国水产学会优秀科技期刊一等奖,中国科学院优秀期刊三等奖,中国期刊方阵“双效”期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,美国生物科学数据库,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:21674