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中国植物内生微生物研究的发展和展望
  • ISSN号:0253-2654
  • 期刊名称:《微生物学通报》
  • 时间:0
  • 分类:Q939.5[生物学—微生物学]
  • 作者机构:[1]南京农业大学生命科学学院,江苏南京210095, [2]海南丰源无公害农业技术研究所,海南海口570207
  • 相关基金:国家自然科学基金项目(30670008;31372365)
中文摘要:

[目的]本文旨在确定圆柱披碱草(Elymus cylindricus)内生真菌的分类地位。[方法]选择5株分离自新疆、青海的圆柱披碱草内生真菌菌株,采用SDS法提取基因组DNA,利用选择性引物对其tub B和tef A基因片段进行扩增和克隆测序,下载NCBI中的相似序列并进行比对分析,用MEGA 6.0软件构建系统发育树。[结果]成功获得差异极小的各菌株序列,且tub B序列确认为仅1个拷贝,而2个菌株的tef A序列则有2个拷贝。在最大简约树上披碱草菌株的tef A和tub B第1拷贝均在EBY(Epichloe bromicola/E.yangzii)大支上,与E.sinica比较接近;tef A的第2拷贝与ETC(E.typhina complex)中的成员聚类。[结论]Epichloesp.-Elymus cylindricus是一个新的共生体组合。圆柱披碱草分离菌株为杂交起源的Epichloe属真菌,可能起源于E.bromicola(syn.E.yangzii)和E.sylvatica间的杂交。

英文摘要:

[Objectives]To identify the endophyic strains obtained from Elymus cylindricus,phylogenetic analysis were conducted.[Methods]Five fungal strains were incubated. Then their genomic DNA samples were extracted by SDS extraction method. Fragments of β-tubulin( tub B) and translation elongation factor 1-α( tef A) genes were amplified by specific PCR primers for isolated strains.Related sequences of tub B and tef A were downloaded from NCBI,then were aligned and analyzed by DNAssist and Bio Edit. The phylogenetic characteristics of these strains were analyzed through the Maximum Parsimony tree performed by MEGA 6.0. [Results]All the sequence were nearly similar. Five strains were confirmed to possess single alleles of tub B,while 2 of them had 2 alleles of tef A.In the tree based on tub B fragment,they clustered together with Epichloe sinica within EBY( Epichloe bromicola / E. yangzii) clade. In the tree based on tef A fragment,allele-1 were grouped with E. sinica,while allele-2 within the ETC( E. typhina complex) clade.[Conclusions]They might be a new association of hybrid Epichloe sp.-Elymus cylindricus symbiosis. Strains obtained from Elymus cylindricus could origin from hybridization of E. bromicola( syn. E. yangzii) and E. sylvatica.

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期刊信息
  • 《微生物学通报》
  • 中国科技核心期刊
  • 主管单位:中国科学院
  • 主办单位:中国科学院微生物研究所 中国微生物学会
  • 主编:赫荣乔
  • 地址:北京市朝阳区北辰西路一号院3号中国科学院微生物研究所内B401室
  • 邮编:100101
  • 邮箱:xuj@sun.im.ac.cn
  • 电话:010-64807511
  • 国际标准刊号:ISSN:0253-2654
  • 国内统一刊号:ISSN:11-1996/Q
  • 邮发代号:2-817
  • 获奖情况:
  • 1992年中国科学技术协会优秀学术期刊三等奖,1992年国家科委中共中央宣传部新闻出版署“全国优...,2000年中国科学院优秀期刊三等奖,中国期刊方阵“双效”期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),波兰哥白尼索引,美国剑桥科学文摘,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:29487