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程序性细胞凋亡基因第5外显子多态性与中国南方汉族人群系统z性红斑狼疮遗传易感性研究
  • ISSN号:1672-8467
  • 期刊名称:《复旦学报:医学版》
  • 时间:0
  • 分类:R593.24[医药卫生—临床医学;医药卫生—内科学]
  • 作者机构:[1]复旦大学公共卫生学院流行病学教研室,上海200032, [2]苏州大学附属第一医院皮肤科,苏州215006, [3]杭州市第三人民医院皮肤科,杭州310009, [4]上海市皮肤病性病医院检验科,上海200050, [5]复旦大学附属中山医院皮肤科,上海200032
  • 相关基金:国家自然科学基金项目(30471485)
中文摘要:

目的探讨程序性细胞凋亡基因( programmed cell death-1, PDCD1 ) 第5外显子单核苷酸多态性(SNP)与中国南方汉族人群系统性红斑狼疮(systemic lupus erythematosus, SLE)易感性的关系。方法采用病例对照研究设计,收集132例病例和160例对照,应用PCR-RFLP技术检测PD1.6G〉A和PD1.5C〉T两个位点的SNPs,运用SAS8.2软件包进行基因型、等位基因和单倍型等的关联性分析。结果对照组PD1.6G〉A位点突变基因型AA频率高于SLE患者(X^2=5.123,P=0.023),患者中的A等位基因频率低于对照组(X^2=8.036,P=0.005);PD1.5C〉T位点中,CT基因型在对照组中的比例较低(X^2=15.380,P=0.000),病例组的T等位基因频率高于对照组(X^2=11.631,P=0.001)。同时,两位点等位基因间存在连锁不平衡(X^2=10.708,P=0.001),且病例组和对照组单倍型分布不同(X^2=18.821,P=0.000);其中,病例组A—C单倍型频率低于对照组(X^2=15.812,P=0.000),A—T和GT单倍型频率高于对照组(X^2=4.119,P=0.042和X^2=6.621,P=0.010)。结论在中国南方汉族人群中,PDCD1基因PD1.6G〉A和PD1.5C〉T两个位点多态性与SLE具有相关性,PD1.6G〉A的G—A突变可能是SLE的保护因素(OR=0.57,95%CI:0.39—0.84),PDl.5C〉T的C—T突变可能是SLE的危险因素(0R=2.02,95%CI:1.35—3.02)。A—T和GT单倍型可能是SLE的易感单倍型(OR=1.58,95%CI:1.02—2.46和0R=3.02,95%CI:1.30—7.02),A—C单倍型可能是SLE的保护性单倍型(OR:0.51,95%CI:0.36—0.71)。

英文摘要:

Objective To approach the association of two single nucleotide polymorphisms (SNPs) within the exon-5 of programmed cell death-1 (PDCD1) gene and the development of systemic lupus erythematosus(SLE) in Southern Chinese Han people. Methods 132 cases and 160 normal controls were enrolled with the aim of case-control design, and SNPs of PD1.6G)A and PD1. 5C)T were genotyped by PCR-RFLP. Moreover, we calculated ORs and LD as well as the frequencies of haplotypes for the two loci. Results It was found that mutated AA genotype frequency of PD1.6G)A in controls was significantly higher than the one in cases (X^2 = 5. 123, P = 0. 023), and the frequency with A alleles in patients was significantly decreased relative to the one in healthy controls (X^2 = 8. 036, P= 0. 005). In PD1.5C〉T, CT frequency in controls was lower than the one in cases with statistically significance (X^2 = 15. 380, P = 0. 000), and the carrier frequency of T allele in cases was significantly increased compared with controls (X^2 = 11. 631, P = 0. 001). Moreover, there were linkage disequilibriums between alleles of PD1.6G〉A and PD1.5 C〉T (X^2 = 10. 708, P = 0. 001). The haplotype distributions between cases and controls were significantly different in PDCDI(X^2 = 18. 821, P = 0. 000), with relative higher proportion of A-T and G-T haplotypes (X^2 = 4. 119, P = 0. 042; X^2 = 6. 621, P = 0. 010) and less proportion of A-C haplotype (X^2= 15. 812, P = 0. 000) in SLE group. Conclusions The polymorphisms of PD1.6G〉A and PD1.5C)T were associated with SLE in Southern Chinese Han people. The mutation of G→A in PD1.6G〉A might be protective from SLE (OR= 57, 95% CI.. 0. 39-0. 84) , while the C→T mutation in PD1.5C〉T might be harmful (OR = 2.02, 95% CI: 1.35 - 3.02). The haplotypes of A-T and G-T might be susceptible to SLE (OR= 1.50, 95% CI: 1.02-2.46 and 0R=3.02, 95% CI:1.30-7.02), and the A-C haplotype might play a protective role in development of SLE (OR= 0.51, 95% C

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期刊信息
  • 《复旦学报:医学版》
  • 北大核心期刊(2011版)
  • 主管单位:教育部
  • 主办单位:复旦大学
  • 主编:桂永浩
  • 地址:上海医学院路138号285信箱
  • 邮编:200032
  • 邮箱:xbyxb@shmu.edu.cn
  • 电话:021-54237164 021-54237314
  • 国际标准刊号:ISSN:1672-8467
  • 国内统一刊号:ISSN:31-1885/R
  • 邮发代号:4-262
  • 获奖情况:
  • 2008年第二届中国高校优秀科技期刊奖,2010年第三届中国高校精品科技期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),波兰哥白尼索引,荷兰文摘与引文数据库,美国剑桥科学文摘,美国生物科学数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版)
  • 被引量:11703