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大豆百粒重QTL定位及多样性评价
  • ISSN号:0578-1752
  • 期刊名称:《中国农业科学》
  • 时间:0
  • 分类:S828.2[农业科学—畜牧学;农业科学—畜牧兽医]
  • 作者机构:河北省农林科学院粮油作物研究所/国家大豆改良中心石家庄分中心/农业部黄淮海大豆生物学与遗传育种重点实验室,石家庄050035
  • 相关基金:国家自然科学基金(31471522,31201234)、河北省自然科学基金(C2015301012)、国家高技术研究发展计划(863计划)(2012AA101106)、国家产业技术体系(CARS-004-PS06)、国家转基因重大专项(2014ZX0800402B)
中文摘要:

【目的】百粒重是大豆重要的育种目标性状,它不仅是产量构成因子之一,也是重要的品质性状,不同用途对百粒重有着不同要求。通过连锁分析定位大豆百粒重QTL,获得连锁标记,阐明QTL连锁标记在种质资源中的多样性特征,为百粒重定向改良提供依据。【方法】以冀豆12×黑豆(ZDD03651)杂交衍生的188个重组自交系的F6:8和F6:9群体为材料,采用Win QTL Cartographer V.2.5的复合区间作图法(CIM),经300次Permutation计算,以P=0.05显著性水平确定QTL存在的阈值,定位百粒重QTL。连续3年在石家庄对来自国内外的205份大豆育成和地方品种的百粒重进行表型鉴定,利用定位到的百粒重QTL连锁SSR标记对种质资源材料进行基因型分型,在每个标记处确定发生频率大于5%(对应资源材料个数大于10个)的等位变异为有效等位变异,计算等位基因多样性指数,明确百粒重QTL在种质资源里的多样性特征,通过多重比较确定不同等位变异与百粒重的关系。【结果】在冀豆12×黑豆后代群体中,百粒重呈正态连续分布,遗传力为88.72%。共检测到5个百粒重QTL,分别位于Chr.02(D1b)、Chr.06(C2)、Chr.08(A2)和Chr.17(D2)染色体,遗传贡献率(R^2)7.68%—12.83%,加性效应-0.65—-0.84 g,增效基因均来自冀豆12。年份间稳定的QTL有2个,其中,q SW-6-1位于第6染色体Satt457—Sat062,紧密连锁的标记为Satt281,贡献率最大值为12.02%,加性效应最大值为-0.81g;q SW-17-1位于第17染色体Satt301—Satt310,贡献率最大值为12.83%,加性效应最大值为-0.84g。在205份资源材料中,百粒重遗传力为96.88%。百粒重连锁SSR标记有效等位变异数为2—8个,多样性指数为0.34—0.82。发掘出大粒相关等位变异6个,分别为Satt281-227 bp、Barcsoyssr2304-245 bp、Satt301-199 bp、Sat406-214 bp、Satt119-136 bp和Satt341-218 bp。其中Satt281-227 bp在RIL和资源材料中均为百粒重增效效应,主要

英文摘要:

【Objective】 Seed weight is a major target of breeding as it is not only a component of seed yield but it also affects quality, so, different uses have different requirements for it. This study is to identify QTL associated with 100-seed weight, obtain the linkage markers and explore its diversity. Eventually provide a scientific basis of genetic improvement of seed weight.【Method】F6:8 and F6:9 population of 188 recombinant inbred lines(RIL) derived from a cross of Jidou12×Heidou were used to detect the QTL associated with 100-seed weight, the composite interval mapping(CIM) method in Win QTL Cartographer V. 2.5 software was used for the QTL analysis based on the seed weight observed in two years. A putative QTL was claimed using a genome-wise type I error of P=0.05 determined by 300 permutations. In addition, a total of 205 soybean landraces and improved cultivars were used to identify phenotype through 3 years, and genotyped by SSR marker that linked with seed weight. Allelic frequency variation is more than 5%(corresponding to the number of resource materials is more than 10) as the efficient allelic variation.【Result】In RIL, the distribution frequency of seed weight was basically in normal, and the narrow-sense heritability was 88.72%. Five QTL for 100-seed weight were identified. These QTL scattered on Chr.02(D1b), Chr.06(C2), Chr.08(A2) and Chr.17(D2), respectively and could explain 7.68%-12.83% of the phenotype variation. The additive effect of the QTL varied from-0.65 g to-0.84 g. Two QTL were detected in two years. The q SW-6-1 flanked by SSR markers Satt457 and Sat_062 on Chr.06 explaining 12.02% of the phenotype variation, linked marker was Satt281, and the additive effect was-0.81 g. The q SW-17-1 flanked by SSR markers Satt301 to Satt310 on Chr.17 explaining 12.83% of the variation, and the additive effect was-0.84 g. Based on the germplasm, the narrow-sense heritability of seed weight was 96.88%, the allele number of the eight SSR loci, associated with fiv

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期刊信息
  • 《中国农业科学》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国农业部
  • 主办单位:中国农业科学院 中国农学会
  • 主编:万建民
  • 地址:北京中关村南大街12号中国农业科学院图书馆楼4101-4103室
  • 邮编:100081
  • 邮箱:zgnykx@caas.cn
  • 电话:010-82109808 82106279
  • 国际标准刊号:ISSN:0578-1752
  • 国内统一刊号:ISSN:11-1328/S
  • 邮发代号:2-138
  • 获奖情况:
  • 中国期刊方阵“双高”期刊,第三届中国出版政府奖提名奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘,中国北大核心期刊(2000版)
  • 被引量:85620