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亚东鲑线粒体COI与 COⅡ基因遗传多样性分析
  • ISSN号:0517-6611
  • 期刊名称:《安徽农业科学》
  • 时间:0
  • 分类:S188[农业科学—农业基础科学]
  • 作者机构:[1]上海海洋大学水产与生命学院农业部淡水水产种质资源重点实验室,上海201306
  • 相关基金:农业部公益性行业(农业)科研专项(201203086);国家自然科学基金项目(31272633,31201760);上海高校知识服务平台(ZFl206).
中文摘要:

[目的]分析亚东鲑线粒体COI与COⅡ基因遗传多样性。[方法]分别从西藏亚东河与亚东鲑养殖站采集野生与养殖亚东鲑各15尾样品,对其线粒体DNACOI、COⅡ基因全序列进行PCR扩增、测序比对。[结果]序列长度分别为631、634bp。序列分析结果显示:30条亚东鲑线粒体DNACOI、COⅡ序列分别检测到1种、3种单倍型,均无碱基插入、缺失,COⅡ序列有2个位点出现碱基替换;COI、COil序列T、C、A和G碱基平均含量分别为29.5%、28.97%,30.6%、28.47%,22.5%、27.03%和17.4%、15.53%,其中A+T的含量(52.O%、56.0%)均显著高于G+c含量(48.O%、44.0%),均表现出明显的碱基偏倚;COI、COⅡ单倍型多态性(h)与核苷酸多态性("iT)值分别为0、0.80与0、0.0001;根据Kimura双参数模型构建基于线粒体COI、COU序列的系统进化树,两亚东鲑鱼遗传距离分别为0、0.0024。【结论】西藏亚东鲑的遗传多样性水平较低,且养殖和野生群体无遗传分化。

英文摘要:

[ Objective ] The aim was to analyze genetic diversity analysis of Salmo truttafario based on CO I and CO lI. [ Method ] Toal of 30 wild and cultured Salmo truttafario were collected from Tibet Yadong River and the nursery, respectively (15 each). The PCR amplification and sequencing were done. [ Result] The mitochondrial DNA CO I and CO lI gene sequence of Salmo truttafario was gotten, and the length were 631 and 634 bp, respectively. Sequence analysis results showed that 30 Salmo truttafario mitochondfial DNA CO I and CO H sequences contented 1 and 3 three kinds of haploid type, respectively. Neither of them had base insertions and deletions, CO II sequence had two loci base substitution. Average content of T, C, A and G bases of CO | and CO lI sequence were 29.5% and 29.5% , 30.6% and 28.47%, 22.5% and 27.03%, 22.5% and 27.03%, and the content of A + T (52.0% and 56.0% ) were significantly higher than that of G + C content (48.0% and 44.0% ), which showed a significant base bias. Haploid type polymorphism (h) and nucleotide polymorphism (π) val- ue of CO I and CO II were 0 and 0.80, 0 and 0.000 1 ,respectively. According to Kimura double parameter model building, system evolution- ary tree based on mitochondrial CO I and CO II sequence showed that genetic distance of two population were 0 and 0. 002 4, respectively. [ Conclusion i All results suggested that the genetic diversity of Salmo truttafario in Tibetan was not obvious, and there was no genetic differenti- ation between the cultured and wild population.

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期刊信息
  • 《安徽农业科学》
  • 北大核心期刊(2008版)
  • 主管单位:安徽省农业科学院
  • 主办单位:安徽省农业科学院
  • 主编:曹淑华
  • 地址:合肥市庐阳区农科南路40号
  • 邮编:230031
  • 邮箱:ahnykx@163.com
  • 电话:0551-65148869 65160973
  • 国际标准刊号:ISSN:0517-6611
  • 国内统一刊号:ISSN:34-1076/S
  • 邮发代号:26-20
  • 获奖情况:
  • 1995年获安徽省优秀期刊三等奖,1998年获安徽省优秀期刊三等奖,2002年获第三届全国优秀农业期刊奖,2005年获第四届全国优秀农业期刊一等奖,2005年获安徽省优秀科技期刊一等奖,2006年获第五届全国农业期刊金犁奖学术类一等奖,第四届华东地区优秀期刊,2009年安徽省优秀期刊,RCCSE中国权威学术期刊(A+),中国农业核心期刊(2010)
  • 国内外数据库收录:
  • 美国化学文摘(网络版),日本日本科学技术振兴机构数据库,中国北大核心期刊(2004版),中国北大核心期刊(2008版)
  • 被引量:163721