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联合磁性微球和基质辅助的激光解吸/离子化-飞行时间质谱筛选肾细胞癌血清差异蛋白
  • ISSN号:1000-503X
  • 期刊名称:《中国医学科学院学报》
  • 时间:0
  • 分类:R737.25[医药卫生—肿瘤;医药卫生—临床医学]
  • 作者机构:[1]中国医学科学院北京协和医学院北京协和医院泌尿外科,北京100730
  • 相关基金:基金项目:国家自然科学基金(30772165)
中文摘要:

目的应用蛋白组学技术对前列腺癌血清差异蛋白进行筛选,并建立前列腺癌诊断模型。方法2010年3月至5月间于北京协和医院泌尿外科病房采集12例前列腺癌患者及11例非前列腺癌对照者血清样本,应用弱阳离子磁珠联合基质辅助激光解吸电离飞行时间质谱(matrix—assisted laser desorption/ionization time of flight mass spectrometry,MALDI-TOF MS)技术对前列腺癌患者和对照者血清进行差异蛋白研究,筛选出多个前列腺癌血清差异蛋白,并应用ClinPro Tools2.2软件通过遗传算法建立诊断模型。结果共筛选出前列腺癌与对照组之间差异蛋白峰126个,具有较明显差异的蛋白峰24个(P=0.178)。通过遗传算法优化选择,筛选出符合条件的15个差异蛋白峰建立诊断模型,交叉验证准确性为81.82%,识别能力为100%。结论应用磁珠联合MALDI—TOFMS技术及遗传算法成功建立前列腺癌血清差异蛋白的诊断模型,该模型识别能力高,有助于减少前列腺癌的漏诊率。

英文摘要:

Objective To detect differentially expressed proteins in serum of prostate cancer and to establish a diagnostic model for prostate cancer. Methods Serum samples from 12 patients with prostate cancer and 11 controls hospitalized at our department from March to May 2010 were collected. The weak cation exchange (WCX) beads combined matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) technique was used to detect the differentially expressed proteins in the serum samples of prostate cancer patients and controls. Differentially expressed proteins for prostate cancer were then screened out. Genetic algorithm was utilized to establish a diagnostic model for prostate cancer with ClinProTools 2.2 software. Results Totally 126 different proteins were screened out, of which 24 were significantly different between the prostate cancer patients and controls (P = 0. 178 ). Using the genetic algorithm, 15 differentially expressed proteins were screened out to establish a diagnostic model. The cross-validation of the model was 81.82% and the recognition rate was 100%. Conclusions A diagnostic model of prostate cancer using the WCX magnetic beads combined MALDI-TOF MS technique and genetic algorithm was successfully established. This model has high cross-validation and recognition rate and is helpful to reduce the misdiagnosis rate of prostate cancer.

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期刊信息
  • 《中国医学科学院学报》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国卫生部
  • 主办单位:中国医学科学院 中国协和医科大学
  • 主编:曹雪涛
  • 地址:北京东单三条九号
  • 邮编:100730
  • 邮箱:actacams@263.net.cn
  • 电话:010-65105898 65237951
  • 国际标准刊号:ISSN:1000-503X
  • 国内统一刊号:ISSN:11-2237/R
  • 邮发代号:2-365
  • 获奖情况:
  • 1992年第一届全国优秀科技期刊三等奖,1996年第二届全国优秀科技期刊二等奖,2001年中国期刊方阵双百期刊,2004年卫生部首届医药卫生优秀期刊一等奖,第三届国家期刊奖百种重点期刊奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),波兰哥白尼索引,荷兰文摘与引文数据库,荷兰医学文摘,美国生物医学检索系统,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:19752