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iTRAQ 结合2 DLC-MS/MS 技术筛选前列腺癌差异表达蛋白
  • ISSN号:1674-0785
  • 期刊名称:《中华临床医师杂志(电子版)》
  • 时间:0
  • 分类:R384.1[医药卫生—医学寄生虫学;医药卫生—基础医学]
  • 作者机构:[1]复旦大学附属华山医院泌尿外科,上海200040, [2]上海中医药大学附属岳阳医院中心实验室
  • 相关基金:国家自然科学基金青年科学基金(81202033)
中文摘要:

目的:应用同位素标记相对和绝对定量技术( iTRAQ)结合二维液相色谱-串联质谱技术(2DLC-MS/MS)筛选前列腺癌差异表达蛋白。方法将前列腺穿刺活检的组织标本分为三组:良性前列腺增生组(20例)、前列腺癌组(20例)以及前列腺上皮内瘤组(10例)。对这些组织标本进行蛋白提取、定量和酶解。 iTRAQ标记后(其中114标记良性前列腺增生组,116标记前列腺癌组,117标记前列腺上皮内瘤组),进行2DLC-MS/MS分析。利用ProteinPilot软件(版本3.0)对MS/MS肽段进行分析,在International Swissprot (090210,human)数据库中搜寻蛋白并定量。差异表达蛋白界值设定:大于1.5倍或小于0.66倍且P<0.05认为二者之间存在显著差异表达。 Western-blot 进一步验证了TPD52、Prohibitin-2、EF-Tu、Decorin 的表达。结果总共鉴定出760种蛋白。相对于良性前列腺增生,前列腺癌差异表达蛋白共有46个,其中有20个蛋白明显上调,26个蛋白明显下调。 Western-blot 的验证结果与这些蛋白的表达变化相符合。结论通过iTRAQ技术分析得到的前列腺癌差异表达蛋白可靠,iTRAQ技术为筛选出有意义的前列腺癌生物标记物提供了一个良好的平台。

英文摘要:

Objective To screen differentially expressed proteins of prostate cancer by the proteomics analysis using isobaric tags for relative and absolute quantification ( iTRAQ ) combined with two-dimensional liquid chromatography-tandem mass spectrometry (2DLC-MS/MS).Methods The patients undergoing prostate biopsies were classified in 3 groups:benign prostate hyperplasia(n=20),prostate cancer(n=20)and prostatic intraepithelial neoplasm(n=10).After quantification and enzymolysis of the protein extract from the specimens of the 3 groups,the iTRAQ regents 114,116 and 117 were used to label the peptides of the 3 groups respectively .Then,the mixture of the peptides was analyzed by 2DLC-MS/MS.The MS/MS data were searched against the International Swissprot (090210,Human)using the Protein Pilot software(version 3.0)for peptide identification and quantification .The fold change cutoff ratio>1.50 or <0.66 was selected to designate proteins of differential expression ( P<0.05 ) .Several differentially expressed proteins such as Tumor protein D 52(TPD52),Prohibitin-2,Elongation factor Tu(EF-Tu)and Decorin were verified by Western-blot assay .Results A total of 760 proteins were identified from the International Swissprot ( 090210 , Human ) .Based on the condition of screening differentially expressed proteins , comparing with BPH,20 proteins were significantly up-regulated ( >1.5-fold ) and 26 were significantly down-regulated in PCa (<0.66-fold).TPD52,Prohibitin-2,EF-Tu were significantly up-regulated(4.25 fold,4.57 fold and 3.02 fold, respectively)and Decorin was down-regulated(0.43 fold)in PCa.The results of Western-blot assay were consistent with the proteomic changes of these 4 proteins.Conclusion The differentially expressed proteins of PCa identified by proteomic analysis using iTRAQ are reliable .The iTRAQ technology provides a good platform to identify more significant biomarkers of PCa .

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期刊信息
  • 《中华临床医师杂志(电子版)》
  • 主管单位:
  • 主办单位:中华医学会
  • 主编:
  • 地址:北京市西直门北大街32号B座606C室
  • 邮编:100082
  • 邮箱:lcdoctor@163.com
  • 电话:010-62219211
  • 国际标准刊号:ISSN:1674-0785
  • 国内统一刊号:ISSN:11-9147/R
  • 邮发代号:
  • 获奖情况:
  • 国内外数据库收录:
  • 美国化学文摘(网络版),波兰哥白尼索引
  • 被引量:30430