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tRNA^val-shRNA表达框在筛选HBV C基因小干扰RNA靶位中的应用
  • ISSN号:1008-9292
  • 期刊名称:《浙江大学学报:医学版》
  • 时间:0
  • 分类:R318.5[医药卫生—生物医学工程;医药卫生—基础医学]
  • 作者机构:[1]浙江大学医学院附属第一医院传染病研究所,浙江杭州310003
  • 相关基金:国家自然科学基金(30371270)资助项目.
中文摘要:

目的:以tRNA^val-shRNA表达框技术筛选高效的HBV C基因siRNA靶位。方法:针对HBV C基因序列设定5个siRNA靶位,以一步重叠延伸PCR技术生成含tRNA^val启动子的shRNA表达框(SEC),分别与HBV C基因与EGFP融合表达质粒(pC-EGFP)共转染AD293细胞,转染后48h,流式细胞术检测融合基因荧光表达情况,半定量RT-PCR法检测HBV-C基因mRNA表达水平。以筛选的shRNA表达框转染hepG2.2.15细胞,72h后放免法检测细胞培养上清HbsAg、HbeAg水平,RT-PCR检测细胞HBV pgRNA水平。结果:共转染shRNA表达框能有效抑制融合表达质粒(pC-GFP)荧光强度和HBV C mRNA表达,其中SEC-492i抑制效率最佳,而SEC-282i相对较差。选定的492i表达框(SEC-492i)及282ishRNA表达框(SEC-282i),均呈剂量依赖性抑制hepG2.2.15细胞HbeAg分泌和HBV pgRNA水平,其中SEC-492i抑制HbeAg和HBV pgRNA水平明显优于SEC-282i。结论:在选定的5个siRNA靶位中,以492i靶位RNAi效率最高。tRNA^val-shRNA表达框技术可用于抗HBV高效siRNA靶位的筛选,有进一步推广应用价值。

英文摘要:

Objective: To screen efficient siRNA for inhibiting hepatitis B virus using the technique of PCR-based tRNA^val Pol Ⅲ-shRNA expression cassettes (SECs). Methods: Based on core gene sequence of HBV, five target sites of siRNA were designed, tRNAvat Pol Ⅲ-shRNA expression cassettes produced by one-step overlapping extension PCR strategy were cotransfected with HBV C gene and pC-EGFP plasmid into AD293 cells respectively. Forty-eight hours after transfection, fluorescence of HBVC-GFP protein was detected by fluorescence-activated cell sorting (FACS); HBV C mRNA was detected by semi-quantitative RT-PCR. HBV-producing HepG2.2.15 cells were transfected with selected SECs for 72 h, HBsAg and HBeAg in the cell culture medium were detected by radioimmunoassay assay (RIA). HBV pgRNA from cell total RNA was detected by semi-quantitative PCR. Results: Co-transfection with pC-GFP plasmid and SECs into AD293 cells resulted in inhibition expression of HBV C gene and decrease of EGFP fluorescence intensity. SEC-492i showed most significant inhibition effect on HBV C-EGFP expression compared with other SECs. Selected SEC-492i or SEC-282i targeting core gene could efficiently decrease expression of HBeAg and the level of HBV pgRNA in a dose-dependent manner. SEC-492i inhibited HBV replication and antigen expression in a more efficient way than SEC-282i at the same final concentration. Conclusion: The expressed shRNA, which targets sites on HBV C mRNA in 492i,is to have having most efficient RNAi effect, tRNAval Pol Ⅲ-shRNA expression cassettes produced by one-step overlapping extension PCR strategy should be useful for identification of optimal siRNA.

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期刊信息
  • 《浙江大学学报:医学版》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国教育部
  • 主办单位:浙江大学
  • 主编:罗建红
  • 地址:杭州市天目山148号
  • 邮编:310007
  • 邮箱:zdxbyxb@zju.edu.cn
  • 电话:0571-88272797
  • 国际标准刊号:ISSN:1008-9292
  • 国内统一刊号:ISSN:33-1248/R
  • 邮发代号:32-2
  • 获奖情况:
  • 三次全国高校优秀自然科学学报评比先后荣获二等奖...
  • 国内外数据库收录:
  • 美国化学文摘(网络版),波兰哥白尼索引,荷兰文摘与引文数据库,美国生物医学检索系统,中国中国科技核心期刊,中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版)
  • 被引量:6685