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猫视神经慢性损伤相关差异表达基因消减cDNA文库的构建
  • ISSN号:0258-879X
  • 期刊名称:《第二军医大学学报》
  • 时间:0
  • 分类:R774.6[医药卫生—眼科;医药卫生—临床医学]
  • 作者机构:[1]第二军医大学长征医院神经外科,上海市神经外科研究所,上海200003
  • 相关基金:国家自然科学基金(30271333).
中文摘要:

目的:构建猫视神经慢性损伤相关差异表达基因消减cDNA文库。方法:15只成年家猫随机分为正常对照组、视神经压迫4周组和视神经压迫8周组(n=5),压迫4周组和压迫8周组猫利用球囊植入法建立慢性视神经损伤模型。取各组动物视神经,TRIzol法提取总RNA,SMART技术合成cDNA,随后利用抑制消减杂交方法分离受压4周和8周视神经中差异表达基因的cDNA片段,将其与T载体进行T/A连接构建文库,将连接产物用氯化钙转化法转化大肠杆菌进行文库扩增和蓝白斑筛选,随机挑取300个白色克隆进行菌落PCR鉴定。结果:菌落PCR扩增显示每个文库80%的克隆中均有200~800bp的插入片段。结论:成功构建猫视神经慢性损伤相关差异表达基因消减cDNA文库,为进一步筛选、克隆慢性视神经损伤相关差异表达基因奠定了基础。

英文摘要:

Objective:To construct subtractive cDNA libraries of differentially expressed genes associated with chronic optic nerve injury in cats. Methods: Fifteen adult cats were randomly divided into 3 groups (n = 5) : control group, 4-w compression group and 8-w compression group. The chronic optic nerve injury was produced by an inflatable balloon implanted under the optic chiasm. The total RNA was prepared from optic nerves of each group by TRIzol method. Double-stranded cDNA was produced by SMART PCR cDNA synthesis protocol. Suppression subtractive hybridization (SSH) was used to isolate the cDNA fragments of differentially expressed genes in the optic nerves after 4-w and 8-w compression. The cDNA fragments were directly inserted into T/A cloning vector to establish the subtractive library, followed by amplification of the libraries through E. coli transformation with calcium chloride and screening of blue and white clones. Three hundred positive bacterial clones were randomly picked in each library and identified by colony PCR. Results: Analysis of the white clones by PCR showed that 80% clones contained 200-800 bp inserts in each library. Conclusion: Four subtractive cDNA libraries of differentially expressed genes associated with chronic optic nerve injury have been successfully constructed by SSH and T/A cloning techniques,which lays a solid foundation for screening and cloning specific differentially expressed genes associated with chronic optic nerve injury.

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期刊信息
  • 《第二军医大学学报》
  • 北大核心期刊(2011版)
  • 主管单位:第二军医大学
  • 主办单位:第二军医大学
  • 主编:吴孟超
  • 地址:上海市翔殷路800号
  • 邮编:200433
  • 邮箱:bxue@smmu.edu.cn
  • 电话:021-81870791
  • 国际标准刊号:ISSN:0258-879X
  • 国内统一刊号:ISSN:31-1001/R
  • 邮发代号:4-373
  • 获奖情况:
  • 2008年被评为首批"中国精品科技期刊"2008年获第二...,2004年获第四届全军医学期刊质量评比优秀奖,2002年获第二届国家期刊奖百种重点期刊奖,2000年获首届《CAJ-CD规范》执行评优活动执行优秀奖,1999年获上海高校优秀自然科学学报评比一等奖,1999年获全国高校自然科学学报及教育部优秀科技期...,1997年获上海科技期刊评比二等奖
  • 国内外数据库收录:
  • 俄罗斯文摘杂志,美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,荷兰文摘与引文数据库,荷兰医学文摘,美国剑桥科学文摘,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:30859