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牛SREBP1基因shRNA序列的筛选及其腺病毒载体的构建与鉴定
  • ISSN号:0578-1752
  • 期刊名称:《中国农业科学》
  • 时间:0
  • 分类:S852.659.6[农业科学—基础兽医学;农业科学—兽医学;农业科学—畜牧兽医]
  • 作者机构:[1]西北农林科技大学动物科技学院,陕西杨凌712100, [2]国家肉牛改良中心,陕西杨凌712100
  • 相关基金:国家自然科学基金(31272411)、“十二五’’国家863计划(2011AA100307.02)、教育部“长江学者和创新团队发展计划”(IRT0940)、“十二五,,国家科技支撑计划(201IBAD28804.03)、国家转基因生物新品种培育重大专项(2011ZX08007-002)、国家肉牛牦牛产业技术体系(CARS.38)
中文摘要:

【目的】筛选可靶向干扰牛的SREBP1基因的有效shRNA,构建相应腺病毒载体并包装重组腺病毒,为在细胞水平上研究SREBP1基因的功能和作用机制提供基础。【方法】以秦川牛SREBP1基因为研究对象,首先靶向其编码区(codingsequence,CDS)序列设计并合成6条干扰和1条阴性对照shRNA,并构建表达载体pENTR—u6-shRNA。然后与载体psiCHECK-II—SREBP1共转染293A细胞,筛选有效的pENTR—u6-shRNA。其次将筛选的pENTR-u6-shRNA和阴性对照pENTR-U6-NC分别与腺病毒骨架载体pAd/PL-DEST体外重组,得到腺病毒重组载体,并在293A细胞包装扩繁得到高滴度腺病毒,GFP标记法测定病毒滴度。最后将病毒侵染牛前体脂肪细胞,实时荧光定量法(qRT—PCR)检测干扰效率。【结果】筛选出靶向牛SREBP1基因干扰效率为87.4%的shRNA-1053。构建了pad~1053和阴性对照pAd—NC重组腺病毒载体并包装得到Ad-1053和Ad—Nc高滴度病毒,测定得到的病毒滴度分别为7×108。GFU.mL^-1和9×10^8GFU·mL^-1。Ad-1053和hd-NC分别侵染牛前体脂肪细胞,qRT—PCR检测结果显示Ad-1053可显著降低SREBP1基因的mRNA水平(干扰率〉85%),而Ad-NC对SREBP1基因表达无明显影响。【结论】成功筛选得到靶向干扰牛SREBP1基因的有效shRNA,并包装扩繁获得相应的高滴度重组病毒。

英文摘要:

[Objective] The aim of this study was to construct recombinant adenovirus carrying effective small hairpin RNA (shRNA) which can exclusively interfere NotI bovine sterol-regulatory-element-binding protein 1 (SREBP1) gene expression, thus providing a basis for studying the function and mechanism of SREBP1 gene at cellular level. [Method] According to the coding sequence (CDS) region of SREBP1 gene, six pairs of inhibition shRNA and one pairs of negative control shRNA were designed and fiLrther inserted into pENTR-U6 to construct pENTR-U6-shRNA expression vector. The cotransfection of expression vector psiCHECK- II carrying SREBP1 and the obtained pENTR-U6-shRNA was carried out in 293 A cell lines to select efficient shRNA. The efficient shRNA and shRNA-NC were connected to pAD/BL-DEST to construct the recombinant plasmid, respectively. The obtained recombinant adenovirus vectors were transfected into 293A cells to package. Then, the adenovirus were amplified and harvested. Real-time PCR (qRT-PCR) was used to detect and confirm the interference effect of the harvested adenovirus on the target gene SREBP1 in bovine pre-adipocytes. The viral titer was determined by GFP labeling method. [Result] Results showed that shRNA-1053 significantly decreased the expression of SREBP1 by 87.4%. The linearized recombinant adenovirus vector carrying shRNA- 1053 and shRNA-NC transfected 293A cells, and further packaged and amplified high-titer recombinant adenovirus Ad- 1053 and Ad-NC (7× 10^8 GFU/mL and 9x 108 GFU/mL). qRT-PCR results elucidated Ad-1053 significantly down-regulated mRNA expression level of SREBP1 gene in bovine pre-adipocytes (Interfering efficiency 〉85%), while Ad-NC did not. [Conclusion] In this study, the recombinant adenovirus, carrying efficient shRNA designed for RNA interference study of bovine SREBP1 gene, was constructed successfully.

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期刊信息
  • 《中国农业科学》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国农业部
  • 主办单位:中国农业科学院 中国农学会
  • 主编:万建民
  • 地址:北京中关村南大街12号中国农业科学院图书馆楼4101-4103室
  • 邮编:100081
  • 邮箱:zgnykx@caas.cn
  • 电话:010-82109808 82106279
  • 国际标准刊号:ISSN:0578-1752
  • 国内统一刊号:ISSN:11-1328/S
  • 邮发代号:2-138
  • 获奖情况:
  • 中国期刊方阵“双高”期刊,第三届中国出版政府奖提名奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘,中国北大核心期刊(2000版)
  • 被引量:85620