目的:探索中国人群中叶酸/同型半胱氨酸代谢通路上的基因多态性与非综合征型唇腭裂(isolated non-syndromic cleft lip with or without eleft palate,NSCL/P)的关联关系及可能存在的基因一环境交互作用。方法:在806个中国人群的核心家庭中,对叶酸/同型半胱氨酸通路上的18个基因进行了传递不平衡检验以及基因一环境交互作用分析。环境因素包括母亲孕期吸烟、被动吸炯、饮酒及服用多维生素补充剂。结果:经过质量控制的筛选,共对257个位点的单核苷酸多态性(single nucleotide polymorphisms,SNPs)进行了传递不平衡检验及交互作用分析,结果显示,共有4个SNPs(rs6428977、rsl2060264、rs7730643和rs4920037)与NSCL/P显著关联(P〈0.05)。但在Bon—ferroni校正后,该通路上的代谢基因位点与NSCL/P之间的关联不具有统计学意义。经多重检验校正后,未发现常见孕期环境暴露与叶酸/同型半胱氨酸代谢通路上的基因多态性存在显著的交互作用。结论:未发现叶酸/同型半胱氨酸代谢通路上的基因多态性与NSCL/P之间存在关联。
Objective :To explore the association between 18 candidate genes encoding enzymes on the folate/homocysteine metabolism pathway and non-syndromie cleft lip with or without cleft palate ( NSCL/ P) in Chinese populations. Methods: A total of 806 NSCL/P trios were drawn by an international consortium, which conducted a genome-wide association study using a case-parent trio design to investigate genes affecting risks to NSCL/P. The transmission disequilibrium test (TDT) was used for deviation from Mendelian expectations for 257 SNPs in 18 folate/homocysteine metabolism-related genes. The interactions between markers in these gene and environmental risk factors were also tested using conditional Logistic regressions. Results : Although four SNPs ( rs6428977, rs12060264, rs7730643 and rs4920037 ) showed nominal significant association with NSCL/P in the TDT on 806 NSCL/P trios (P 〈0.05) , no significant evidence of linkage and association remained in all the SNPs after Bonferroni correction. Similar tests for interactions between genes and maternal smoking, environmental tobacco smoke, alcohol consumption and multi-vitamin supplementation during pregnancy did not attain statistical significance after correction for multiple comparisons. Conclusion: Folate/homocysteine metabolism-related genes could not influence the risk of NSCIJP.