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直肠癌组织异常表达miRNAs的鉴定
  • ISSN号:1672-7347
  • 期刊名称:《中南大学学报:医学版》
  • 时间:0
  • 分类:R394[医药卫生—医学遗传学;医药卫生—基础医学]
  • 作者机构:[1]中南大学湘雅医院消化内科,长沙410008, [2]中南大学湘雅医院老年外科,长沙410008, [3]中南大学湘雅医院病理科,长沙410008
  • 相关基金:国家自然科学基金(81071755,30271516);湖南省科技厅计划项目(2011FJ7004,2011FJ7001).
中文摘要:

目的:筛选直肠癌组织异常表达的miRNAs。方法:采用miRCURY“基因芯片(v.14.0)分析直肠癌组织和邻近非肿瘤组织之间差异表达的miRNA,设定平均上升或下降倍数大于2倍和P值小于0.05为差异标准。结果:88个miRNAs表达显著上调,其中46个基因已证实在结直肠癌组织中表达升高;40个miRNAs表达显著下调,其中15个已报道在结直肠癌组织中表达异常降低。实时定量PCR(RT-qPCR)结果显示:6个表达上调的miRNAs在直肠癌组织中也异常高表达,与基因芯片结果比较,表达水平相差从-11.88%至39.09%;同样6个表达下调的miRNAs在肿瘤组织中也呈低表达,与基因芯片结果比较,表达水平相差从1.35%至29.35%。基因芯片与RT,qPCR两方法分析的结果呈高度相关(r=0.96,P〈0.01)。结论:相对于混合样本(结直肠癌)miRNA表达谱,直肠癌miRNA表达谱呈现出明显的特异性;同时鉴定了一系列新的异常表达的miRNAs。

英文摘要:

Objective: To identify aberrantly expressed miRNAs in rectal cancer. Methods: We used the miKCUKY Array LNA microRNA chip (v.14.0) to evaluate miRNA expression levels between rectal cancer tissues and adjacent non-tumor tissues; an average change more than 2-fold (and P value less than 0.05) was set as a cutofflevel. All 6 paired rectal cancers were classified pathology stage C or D. Results: Eighty-eight miRNAs were up-regulated and 46 miRNAs have been reported in colorectal cancer; 40 miRNAs were down-regulated in rectal cancers and 15 miRNAs have been reported in colorectal cancer. To compare the relative miRNA expression levels as measured by RT-qPCR and chip analysis, we analyzed expression levels of these miRNAs in the cancer tissues. l-he results showed that miRNA expression (increased or decreased) in the paired benign and tumor tissue wasconsistent between the two methods in all cases. Expression levels of 6 up-regulated miRNAs (by chip analysis compared to RT-qPCR) varied in a range from -11.9% to 39.1% .Expression levels of 5 down-regulated miRNAs varied in a range from 1.4% to 29.4%. The Pearson correlation of relative miRNAs expression levels was analyzed by cDNA array versus RT-qPCR, and found to be 0.96 (P〈0.01). Conclusion: miRNA profile in rectal cancer showed unique characteristics, and identified a series of new, aberrantly expressed miRNAs.

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期刊信息
  • 《中南大学学报:医学版》
  • 北大核心期刊(2011版)
  • 主管单位:中华人民共和国教育部
  • 主办单位:中南大学
  • 主编:李桂源
  • 地址:湖南省长沙市湘雅路110号 中南大学湘雅医学院75号信箱
  • 邮编:410078
  • 邮箱:xyxb2005@vip.163.com xyxb2005@126.com
  • 电话:0731-84805495 84805496
  • 国际标准刊号:ISSN:1672-7347
  • 国内统一刊号:ISSN:43-1427/R
  • 邮发代号:42-10
  • 获奖情况:
  • 省优秀科技期刊一等奖,全国优秀科技期刊三等奖,1992、1996年,中国生物医学核心期刊,中国期刊方阵双效期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),荷兰文摘与引文数据库,美国生物医学检索系统,中国中国科技核心期刊,中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版)
  • 被引量:11694