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薄壳山核桃MADS—box基因保守片段的克隆与序列分析
  • ISSN号:2095-1191
  • 期刊名称:《南方农业学报》
  • 时间:0
  • 分类:S664.1[农业科学—果树学;农业科学—园艺学]
  • 作者机构:[1]中国科学院植物研究所,南京210014, [2]南京绿宙薄壳山核桃科技有限公司,南京210072
  • 相关基金:国家自然科学基金项目(31200502);江苏省科技支撑计划项目(BE2012338);江苏省农业科技自主创新资金项目[CX(12)2012];南京市科技计划项目(201101025)
中文摘要:

【目的】克隆薄壳山核桃MADS-box基因的保守片段,进行系统发育分析,为研究薄壳山核桃花发育相关MADS—box家族基因及其发育的分子机理奠定基础。【方法】以薄壳山核桃品种‘马罕’雄花花序为材料,提取总RNA反转录cDNA,采用RT—PCR克隆MADS-box基因的保守片段,并将其推导氨基酸序列与已知拟南芥的MADS.box家族基因进行系统发育分析。【结果】分离获得28条MADS-box基因的cDNA片段,片段长度均为137bp,包含基因起始密码子,核苷酸序列同源性为65.7%-98.5%,其推导氨基酸序列中有11个存在差异。系统发育树分析结果表明,这些基因片段分别归人拟南芥MADS.box基因不同亚家族中,包含ABCDE模型中的各类基因。【结论】薄壳山核桃中存在多种MADS.box家族基因,克隆的片段包含ABCDE模型中的各类花发育基因。

英文摘要:

[Objective]The conservative fragment sequence of MADS-box genes from pecan was cloned and their phy- logeny was assayed in order to provide references for cloning pecan new MADS-box family genes related to flower development and exploring molecular mechanism of pecan flower development. [Method]The total RNA was extracted from male flower of pecan variety 'Mahan' and cDNA was synthesized using inverse transcription. The conservative fragment of MADS-box genes was cloned using RT-PCR, and the phylogenetic analysis was conducted using the deduced amino acid sequences with known Arabidopsis MADS-box gene subfamily. [ResultlTwenty-eight cDNA fragments of MADS-box gene were obtained by RT-PCR, and the length of these fragments was 137 bp including the initiation codon of genes. The homology of these nu- cleotide sequences was between 65.7% and 98.5%. The 11 deduced amino acid sequences were different. According to phyloge- netic tree analysis, all these gene fragments involving different types of gene in ABCDE model were divided into the Arabidopsis MADS-box gene subfamily. [Conclusion]There were many MADS-box genes in pecan. These gene fragments included all types of floral development genes in ABCDE model.

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期刊信息
  • 《南方农业学报》
  • 中国科技核心期刊
  • 主管单位:广西壮族自治区农业科学院
  • 主办单位:广西壮族自治区农业科学院
  • 主编:李杨瑞
  • 地址:南宁市大学东路174号
  • 邮编:530007
  • 邮箱:nfnyxb@163.com
  • 电话:0771-3240518
  • 国际标准刊号:ISSN:2095-1191
  • 国内统一刊号:ISSN:45-1381/S
  • 邮发代号:48-3
  • 获奖情况:
  • 第六届广西十佳自然科学期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,中国中国科技核心期刊,中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘
  • 被引量:5649