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奶牛GPR109A基因SYBR GreenI实时荧光定量PCR检测方法的建立
  • ISSN号:2095-1191
  • 期刊名称:《南方农业学报》
  • 时间:0
  • 分类:S823.91[农业科学—畜牧学;农业科学—畜牧兽医]
  • 作者机构:[1]广西大学动物科学技术学院,南宁530005
  • 相关基金:国家自然科学基金项目(31260631); 广西大学大学生创新创业训练计划项目(2015)
中文摘要:

【目的】建立奶牛G蛋白偶联受体109A基因(GPR109A)的实时荧光定量PCR检测方法,为开展奶牛产后脂类代谢紊乱及酮病发生机理研究奠定基础。【方法】根据Gen Bank中奶牛GPR109A基因和β-actin基因(内参基因)的m RNA保守序列设计合成两对引物,以奶牛肝脏组织c DNA为模板,PCR扩增目的基因后与载体连接构建重组质粒,以SYBR Green I实时荧光定量PCR进行扩增,绘制标准曲线,并对其特异性、敏感性、重复性等进行检验。【结果】GPR109A基因和β-actin基因的实时荧光定量PCR标准曲线方程分别为y=-3.309x+10.92(R2=0.9985)和y=-3.289x+9.794(R2=0.9997),扩增效率分别为101.0%和100.0%。特异性试验结果显示,GPR109A基因和β-actin基因的溶解曲线峰单一,无引物二聚体和非特异性扩增产物生成;敏感性试验结果显示,线性扩增范围广,可检测到1.8×102个拷贝的GPR109A基因;重复性试验结果显示,各扩增反应的变异系数(CV)小于或等于1.7%。【结论】基于GPR109A基因建立的SYBR GreenⅠ实时荧光定量PCR具有操作简便、敏感性高、特异性强和重复性好等特点,可用于牛源性GPR109A基因表达量的快速检测和定量分析。

英文摘要:

[Objective]A real-time fluorescence PCR method for detection of G-protein-coupled receptor 109A(GPR109A) gene was established to provide foundation for further research on disorder of lipid metabolism and pathogenesis of ketosis in postpartum dairy cow. 【Method 】Two pairs of primers were designed according to the conservative sequence of bovine GPR109 A and β-actin(internal reference) gene published by Gen Bank. With c DNA from liver tissues of cow as the template, target genes were amplified by PCR and inserted into vector to establish the recombination plasmid. The recombination plasmids were used for amplifying by real-time PCR. Standard curve was made and the specificity, sensitivity and repeatability were tested. 【Result 】The linear equation of standard curve and regression coefficient of GPR109 A and β-actin genes were y=-3.309x+10.92(R2=0.9985), and y=-3.289x+9.794(R2=0.9997), respectively. The amplification efficiency was 101.0% and 100.0%, respectively. Specificity test results showed that each gene melting curve had a single peak without primer dimer and nonspecific amplification products. Sensitivity test results showed that each gene had a wide range of linear amplification, which could detect out 180 copies of GPR109 A gene.The repeatability test results showed that the coefficient of variation was less than or equal to 1.7%. 【Conclusion】 The established SYBR Green Ⅰ real-time PCR assay based on GPR109 A gene was easy to operate, specific, sensitive and repeatable, which provides a rapid and reliable tool for detecting bovine GPR109 A gene expression quantitatively.

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期刊信息
  • 《南方农业学报》
  • 中国科技核心期刊
  • 主管单位:广西壮族自治区农业科学院
  • 主办单位:广西壮族自治区农业科学院
  • 主编:李杨瑞
  • 地址:南宁市大学东路174号
  • 邮编:530007
  • 邮箱:nfnyxb@163.com
  • 电话:0771-3240518
  • 国际标准刊号:ISSN:2095-1191
  • 国内统一刊号:ISSN:45-1381/S
  • 邮发代号:48-3
  • 获奖情况:
  • 第六届广西十佳自然科学期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,中国中国科技核心期刊,中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘
  • 被引量:5649