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中华稻蝗几丁质脱乙酰基酶2基因的分子特性和生物学功能
  • ISSN号:0578-1752
  • 期刊名称:《中国农业科学》
  • 时间:0
  • 分类:S816.7[农业科学—饲料科学;农业科学—畜牧学;农业科学—畜牧兽医]
  • 作者机构:[1]山西大学应用生物学研究所,太原030006
  • 相关基金:国家自然科学基金项目(31272380,31071980)、教育部博士点专项基金(博导类)(20121401110008)、教育部留学回国人员科研启动基金(20111139)、山西省科学技术发展计划项目(20110311010)
中文摘要:

【目的】研究中华稻蝗(Oxya chinensis)几丁质脱乙酰基酶(chitin deacetylase,CDA)基因的分子特性和生物学功能,为新型农药靶标筛选提供科学依据。【方法】采用生物信息学方法在稻蝗转录组数据库中搜索获得几丁质脱乙酰基酶基因cDNA序列,对其进行保守区域分析,选取赤拟谷盗(Tribolium castaneum)、果蝇(Drosophila melanogaster)、冈比亚按蚊(Anopheles gambiae)、家蚕(Bombyx mori)和云杉卷叶蛾(Choristoneura fumiferana)等昆虫物种的同源序列与中华稻蝗几丁质脱乙酰基酶氨基酸序列进行聚类分析,进一步构建系统发育树;运用real-time PCR方法检测几丁质脱乙酰基酶基因在中华稻蝗5龄若虫不同组织部位和不同发育天数表皮中的表达特性;进一步采用RNA干扰(RNAi)技术研究该基因对中华稻蝗蜕皮发育的影响。【结果】在中华稻蝗转录组数据库中搜索获得2条几丁质脱乙酰基酶基因的cDNA全长序列,生物学软件分析其氨基酸,发现2条序列均具有信号肽,开放阅读框包含3个几丁质脱乙酰基酶保守区域:几丁质结合区(ChBD)、低密度脂蛋白受体区(LDLa)和几丁质脱乙酰基催化结合域(CDA)。聚类分析表明2条序列分别与所选用的5种昆虫CDA2聚为一支。剪切子聚类分析发现2条序列分别与5种昆虫CDA2a和CDA2b相聚为一支,综合序列分析和聚类结果,认为所获得的序列属于几丁质脱乙酰基酶2基因的2个不同剪切子,分别命名为OcCDA2a和OcCDA2b。定量PCR分析表明OcCDA2a和OcCDA2b均在中华稻蝗表皮、前肠和后肠中高表达;在5龄第1天的表皮中表达量较高,之后逐步下降,蜕皮前又略有上升;RNAi研究发现5龄第2天的若虫注射dsOcCDA2a或dsOcCDA2b 24 h后,与注射dsGFP的对照相比,目的基因表达量显著降低,沉默效率分别为96.72%和80.43%;进一步观察试虫的表型,与对照组相比,?

英文摘要:

【Objective】 In order to provide a theoretical basis for selecting novel target for pest control, molecular characteristics and biological function of chitin deacetylase 2 gene (OcCDA2) from Oxya chinensis were studied.【Method】The cDNA sequences of OcCDA2 were searched from transcriptome of O. chinensis by bioinformatics method, and the conserved domain was anaylzed, the homologous sequences from Tribolium castaneum, Drosophila melanogaster; Anopheles gambiae, Bombyx mori and Choristoneura fumiferana were selected to construct phylogenetic tree. The real-time PCR was applied to detect the relative expression of OcCDA2 in different tissues and developmental stages of the 5th instar nymphs. The RNA interference (RNAi) was performed to study the biological function of the OcCDA2 during molting and development of O. chinensis. 【Result】The full length cDNA sequences of two chitin deacetylase genes were identified. The amino acid analysis showed that they possessed the signal peptide, the open reading frame contained three conserved domains: chitin binding domain (ChBD), low-density lipoprotein receptor chass A domain (LDLa) and chitin deacetylase catalytic domain (CDA). The phylogenetic analysis showed that two variants of OcCDA2 clustered with the CDA2s of five insect species, and the two variants differed only in one exon consisting of about 120 nucleotides, the alternatively spliced regions gathered with CDA2a or CDA2b, respectively. Based on sequence alignment and phylogenetic analysis, two variants of OcCDA2 were named as OcCDA2a and OcCDA2b. Tissue-specific expression analysis indicated that both OcCDA2a and OcCDA2b were mainly expressed in the integument, foregut and hindgut. Developmental expression patterns showed that the relative expressions of OcCDA2a and OcCDA2b were higher in the 1st day of 5th instar nymphs, then decreased gradually, and began to ascend before molting. RNAi results showed that the expression of target genes was significantly reduced in 24 h after dsOcCDA

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期刊信息
  • 《中国农业科学》
  • 中国科技核心期刊
  • 主管单位:中华人民共和国农业部
  • 主办单位:中国农业科学院 中国农学会
  • 主编:万建民
  • 地址:北京中关村南大街12号中国农业科学院图书馆楼4101-4103室
  • 邮编:100081
  • 邮箱:zgnykx@caas.cn
  • 电话:010-82109808 82106279
  • 国际标准刊号:ISSN:0578-1752
  • 国内统一刊号:ISSN:11-1328/S
  • 邮发代号:2-138
  • 获奖情况:
  • 中国期刊方阵“双高”期刊,第三届中国出版政府奖提名奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国食品科技文摘,中国北大核心期刊(2000版)
  • 被引量:85620