目的采用T细胞表位预测软件结合体外实验鉴定丙型肝炎病毒(HCV)特异性细胞毒性T细胞(CTL)表位。方法采用T表位预测软件Rankpep预测HCV特异性CTL表位,选择候选CTL表位加以合成;用候选CTL表位肽分别刺激HCV感染者以及健康志愿者的外周血单个核细胞(PBMC),采用酶联免疫斑点试验(ELISPOT)检测PBMC中肽特异性分泌IFN-γ的斑点形成细胞(spots forming cells,SFC)的水平,采用细胞内细胞因子染色(intracellularcytokinestaining,ICS)检测PBMC中肽特异性IFN-γ+CD8+T细胞的水平。结果用5条候选CTL表位肽[NS3450(TVPQ—DAVSR)、NS3594(GPTPLLYRL)、NS4b78(SMMAFSAAL)、NS5a416(SEENVSVVF)和NS5a367(TVSSALAEL)]分别刺激10个HCV感染者和2个健康者的PBMC后,健康者的PBMC不产生IFN-γ,而7个HCV感染者的PBMC产生IFN-γ;HCV感染者的PBMC中肽特异性分泌IFN-γ的细胞的频率为(5~36)SFC/10^5PBMC,肽特异性IFN-γ+CD8+T细胞占总CD8+T细胞的百分比为0.02%~0.25%。结论EL/SPOT结果和ICS结果证实5条肽NS3450、NS3594、NS4b78、NS5a416和NS5a367为全新的HCV特异性CTL表位。
Objective To identify hepatitis C virus (HCV)-specific cytotoxicity T lymphocytes (CTL) epitopes by the combination of T epitopes prediction software and in vitro assays. Methods HCV- specific CTL epitopes were predicted by T epitope prediction software Rankpep and then candidate HCV-spe- cific CTL epitopes were selected. Candidate HCV-specific CTL epitopes were used to stimulate PBMC of HCV-infected patients and healthy volunteers, and then enzyme-linked immunospot (ELISPOT) and intra- cellular cytokine staining ( ICS ) were used to measure the frequencies of IFN-γ-producing cells in total PBMC and the percentages of IFN-γ CD8 + T cells in total CD8 + T cells, respectively. Results Five can- didate CTL epitopes E NS3 450 ( TVPQDAVSR), NS3 594 ( GPTPLLYRL), NS4b 78 ( SMMAFSAAL), NSSa 416(SEENVSVVF) and NSSa 367(TVSSALAEL)] were used to stimulate PBMC of ten HCV-infected pa- tients and two healthy volunteers. PBMC of seven HCV-infected patients secreted IFN-γ while PBMC of healthy volunteers did not produce IFN-γ. The frequencies of peptide-specific IFN-γ-producing cells ranged from 5 to 36 SFC/105 PBMC and the percentages of peptide-specific IFN-γ+ CD8 + T cells ranged from 0.02% -0.25%. Conclusion Results of ELISPOT assay and ICS assay confirm that these five peptides NS3 450, NS3 594, NS4b 78, NS5a 416 and NSSa 367 are identified as novel HCV-specific CTL epitopes.