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IFNA8基因单核苷酸多态性与我国汉族人群结核分枝杆菌易感性的关联分析
  • ISSN号:1000-6621
  • 期刊名称:中国防痨杂志
  • 时间:2014.6.1
  • 页码:418-423
  • 分类:R394[医药卫生—医学遗传学;医药卫生—基础医学]
  • 作者机构:[1]暨南大学第二临床医学院深圳市人民医院胸外科,518020, [2]广东省新发传染病诊治重点实验室, [3]深圳市宝安区慢性病防治院结核病防治科
  • 相关基金:国家自然科学基金(81172732,81341128);广东省自然科学基金(S2012040007213);深圳市科技计划项目(201202189)
  • 相关项目:结核患者IL22/IL22RA1/IL22RA2基因SNP与结核病易感性关联分析和功能学研究
中文摘要:

目的 探讨我国汉族人群IFNA8基因单核苷酸多态性(single nucleotide polymorphisms,SNPs)与结核分枝杆菌易感性的关系.方法 收集2010年1月至2011年12月期间深圳市第三人民医院收治的结核病患者资料,采用病例对照研究方法,应用MassARRAY飞行时间质谱生物芯片技术,分成检测结核病组(1533例)和对照组(1445名)IFNA8基因SNPs(rs1330322、rs10964982、rs4978116)的基因型,计算各SNP位点等位基因频率(allele frequency,AF),应用“四格表”x2检验比较两组人群中候选SNP位点等位基因频率的差别,以P<0.05为差异有统计学意义,并计算相应的比值比(odds ratio,OR)和95%置信区间(95%CI).结果 (1)rs1330322位点A等位基因频率在结核病组、对照组中分别为30.5%(936/3066)、27.8%(804/2890),差异有统计学意义(x2=5.277,OR=1.140,95%CI=1.019~1.275,P=0.022).rs10964982和rs4978116位点的次要等位基因频率在结核病组中分别为17.0%(520/3066)和28.8%(882/3066),在对照组中分别为17.0%(491/2890)和28.6%(826/2890),两组间差异无统计学意义(x2值分别为0.001、0.025,P值分别为0.976、0.874).(2)根据性别分层发现,结核病组女性患者中,rs1330322位点等位基因A频率为30.8%(330/1072),对照组等位基因A频率为26.6%(300/1126),两组间差异有统计学意义(x2=4.605,OR=1.225,95%CI=1.018~1.474,P=0.032).男性结核病组、对照组患者等位基因A频率分别为30.4%(606/1994)、28.6%(504/1764),两组间差异无统计学意义(x2=1.489,OR=1.091,95%CI=0.948~1.256,P=0.222).(3)对女性患者进一步进行年龄分层发现,对于rs1330322位点,≤25岁结核病组、对照组A等位基因频率分别为33.8%(111/328)、25.2%(112/444),两组间差异有统计学意义(x2=6.818,OR=1.516,95%CI=1.108~2.074,P=0.009).而>25岁人群A等位基因在两组人群中差异无统计学意义(x2=0.610,O

英文摘要:

Objective To study the association between single nucleotide polymorphisms (SNP) of IFNA8 gene and the susceptibility to Mycobacterium tuberculosis in Han Chinese.Methods From January 2010 to Decem ber 2011,clinical data of pulmonary tuberculosis patients was collected from Shenzhen Third People's Hospital.There were 1533 patients with tuberculosis as case group and 1445 volunteers as healthy controls.A case-control study was used in the research.SNPs of IFNA8 (rs1330322,rs10964982,rs4978116) were typed by a highthroughput sequenom genotyping platform.The allele frequency (AF),odds ratio (OR) and 95% confidence interval (95%CI) were calculated between case group and control group by using Chi square test,P<0.05 was considered to be significant.Results (1) The frequencies of allele A in the genetic locus rs1330322 were 30.5%(936/3066) in tuberculosis patients (TB) group and 27.8% (804/2890) in healthy control (HC) group.There were statistical differences between two groups(x2 =5.277,OR =1.140,95%CI=1.019-1.275,P =0.022).The minor allele frequencies of rs10964982 and rs4978116 of TB group were 17.0% (520/3066) and 28.8%(882/3066),respectively.And the minor allele frequencies of rs10964982 and rs4978116 of HC group were 17.0% (491/2890) and 28.6 % (826/2890),respectively.The minor allele frequencies of rs10964982 and rs4978116 were no significant differences between two groups (x2=0.001 and 0.025,P =0.976 and 0.874).(2) In sexual stratified analysis of rs1330322,the frequencies of allele A in female population of case group were 30.8%(330/1072),and 26.6%(300/1126) in female of HC group.There were significant differences between two groups of female population (x2=4.605,OR=1.225,95%CI =1.018-1.474,P=0.032).However,among male population,the frequencies of allele A were 30.4%(606/1994) and 28.6% (504/1764) in TB group and HC group without significant differences statistically (x2 =1.489,OR=1.091,95?

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期刊信息
  • 《中国防痨杂志》
  • 中国科技核心期刊
  • 主管单位:中国科学技术协会
  • 主办单位:中国防痨协会
  • 主编:肖和平
  • 地址:北京市西城区东光胡同5号
  • 邮编:100710
  • 邮箱:zgflzz@163.com
  • 电话:010-62257587
  • 国际标准刊号:ISSN:1000-6621
  • 国内统一刊号:ISSN:11-2761/R
  • 邮发代号:2-488
  • 获奖情况:
  • 国内外数据库收录:
  • 美国化学文摘(网络版),波兰哥白尼索引,中国中国科技核心期刊,中国北大核心期刊(2000版)
  • 被引量:18733