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Detection of the Pandemic H1N1/2009 Influenza A Virus by a Highly Sensitive Quantitative Real-time Reverse-transcription Polymerase Chain Reaction Assay
  • ISSN号:1674-0769
  • 期刊名称:《中国病毒学:英文版》
  • 时间:0
  • 分类:S662.5[农业科学—果树学;农业科学—园艺学] Q78[生物学—分子生物学]
  • 作者机构:[1]Institute of Virology, School of Life Sciences, Nanjing University, Nanjing 210093, Jiangsu, China, [2]Taizhou lnstitute of Virology, Taizhou 225300, Jiangsu, China, [3]Jiangsu Affynigen Biotechnologies, Inc., Taizhou 225300, Jiangsu, China, [4]State Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan 430072, China, [5]College of Letters and Sciences, University of Chicago, Chicago, IL 60637, USA, [6]Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, CA 94720, USA
  • 相关基金:This research has been supported by grants from National Basic Research Program of China (No. 2011CB504800), National Natural Science Foundation of China (No. 31100128 and 81030031), National Mega Project on Major Drug Development (2009ZX09103-678), National Small Business Innovation and Research (SBIR) Program of China, the Technology R & D Program of Jiangsu Province, China (BG20077035 and BG2008662), and NIH (RO1-AI041927, RO 1 -AI050468, RO l-DE014 145, and RO 1 -DE014842).
中文摘要:

有特定的教材的量的实时反向抄写的聚合酶链反应(qRT-PCR ) 试金由世界健康组织推荐了() 广泛地为察觉成功地被使用了并且流行 H1N1/2009 监视流行性感冒一个病毒。在这研究,我们报导在 qRT-PCR 试金要使用检测流行 H1N1/2009 病毒的教材的一个新奇集合的设计和描述。最新设计的教材指向高度在红血球凝聚素之中被保存的三个区域(哈) 流行 H1N1/2009 病毒的基因并且与谁推荐教材指向的那些不同。有最新设计的教材的 qRT-PCR 试金为检测流行 H1N1/2009 病毒和包括人,猪,和浣熊狗起源的流行性感冒 B 病毒和流行性感冒 A 病毒的另外的流行性感冒病毒高度象谁推荐教材一样特定、特定。而且,有最新设计的教材的 qRT-PCR 试金与我们的教材作为试金的察觉限制与谁推荐教材显得是至少 10 褶层比那些更敏感,谁推荐教材分别地每反应是目标 RNA 的 2.5 和 25 个拷贝。当与 83 件临床的样品测试了时, 32 被检测用有我们的设计教材的 qRT-PCR 试金积极,当时仅仅 25 由有谁推荐教材的试金是积极的。这些结果建议有最新设计的教材的 qRT-PCR 系统为流行 H1N1/2009 病毒感染的诊断代表高度敏感的试金。

英文摘要:

A quantitative real time reverse-transcription polymerase chain reaction (qRT-PCR) assay with specific primers recommended by the World Health Organization (WHO) has been widely used successfully for detection and monitoring of the pandemic H1N1/2009 influenza A virus. In this study, we report the design and characterization of a novel set of primers to be used in a qRT-PCR assay for detecting the pandemic H1N1/2009 virus. The newly designed primers target three regions that are highly conserved among the hemagglutinin (HA) genes of the pandemic HlN1/2009 viruses and are different from those targeted by the WHO-recommended primers. The qRT-PCR assays with the newly designed primers are highly specific, and as specific as the WHO-recommended primers for detecting pandemic H1N1/2009 viruses and other influenza viruses including influenza B viruses and influenza A viruses of human, swine, and raccoon dog origin. Furthermore, the qRT-PCR assays with the newly designed primers appeared to be at least 10-fold more sensitive than those with the WHO-recommended primers as the detection limits of the assays with our primers and the WHO-recommended primers were 2.5 and 25 copies of target RNA per reaction, respectively. When tested with 83 clinical samples, 32 were detected to be positive using the qRT-PCR assays with our designed primers, while only 25 were positive by the assays with the WHO-recommended primers. These results suggest that the qRT-PCR system with the newly designed primers represent a highly sensitive assay for diagnosis of the pandemic HIN1/2009 virus infection.

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期刊信息
  • 《中国病毒学:英文版》
  • 中国科技核心期刊
  • 主管单位:中国科学院
  • 主办单位:中国科学院武汉病毒研究所 中国微生物学会
  • 主编:陈新文
  • 地址:湖北省武汉市武昌区小洪山中区44号
  • 邮编:430071
  • 邮箱:info@virosin.org
  • 电话:027-87199157
  • 国际标准刊号:ISSN:1674-0769
  • 国内统一刊号:ISSN:42-1760/Q
  • 邮发代号:38-351
  • 获奖情况:
  • 湖北省第1、2、3、4、5、6届优秀期刊,中国科学技术学会 优秀国际科技期刊,2012年中国国际影响力优秀学术期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),波兰哥白尼索引,荷兰医学文摘,美国生物医学检索系统,美国剑桥科学文摘,美国生物科学数据库,中国中国科技核心期刊
  • 被引量:208