位置:成果数据库 > 期刊 > 期刊详情页
湖北麻鸭乙型肝炎病毒全基因组的克隆和序列分析
  • ISSN号:1674-0769
  • 期刊名称:《中国病毒学:英文版》
  • 时间:0
  • 分类:Q78[生物学—分子生物学] S834.83[农业科学—畜牧学;农业科学—畜牧兽医]
  • 作者机构:[1]华中科技大学同济医学院附属同济医院临床免疫研究室,湖北武汉430030, [2]华中科技大学同济医学院微生物学教研室,湖北武汉430030, [3]Institute of Virology, Medical School of Essen University, Essen 45122, Germany
  • 相关基金:国家“十五”科技攻关项目(2001BA705805);国家自然科学基金(30271170)
中文摘要:

为了解湖北地区 This finding was also confirmed by the phylogenetic tree analysis.麻鸭中鸭乙型肝炎病毒(Duck hepatitis B virus, DHBV)自然感染状况以及湖北麻鸭所携带DHBV的基因结构特征,采集了70份成年麻鸭血清并应用PCR技术检测DHBV DNA,对其中一份DHBV DNA阳性血清进行DHBV全基因扩增,并进行克隆与序列测定分析。结果表明,湖北麻鸭DHBV自然携带率为10%;湖北DHBV分离株(GenBank登录号DQ276978)基因组的全长为3024bp,有编码P,S和C蛋白的三个开放阅读框:与GenBank中17株DHBV基因组比较,核苷酸同源性介于89.85%~93.29%之间;S蛋白、C蛋白和P蛋白结构功能区序列均高度保守;而对P蛋白标志性氨基酸和全基因进化树的分析表明,该分离株属于DHBV中国基因型中的一个亚型。

英文摘要:

Seventy serum samples were collected from adult brown ducks in Hubei were collected in order to clarify the natural Duck hepatitis B virus (DHBV) infection in and to characterize the genome structure of DHBV. The complete genome of the DHBV strain was amplified by polymerase chain reaction (PCR) and cloned into T vector and sequenced. The results showed that the natural infection rate of DHBV in Hubei was 10%. The DHBV genome isolated by PCR (GenBank accession number DQ276978 ) had 3 024 nucleotides with three overlapping reading frames encoding the surface, core and the polymerase proteins, respectively. Comparison of genome sequences of this strain with those of 17 DHBV strains from the GenBank revealed an identity from 89.3% to 93.5% at the nucleotide level. The amino acid sequences of the S protein, core protein, and functional domain of the Pol protein were highly reserved among all of these DHBV strains. This Hubei strain was found to share more signature amino acids in the polymerase genes with the "Chinese" DHBV strains than those of the "Western" country strains. This finding was also corroborated by a phylogenetic tree analysis. Therefore, this Hubei DHBV strain should be classified to a subtype of the Chinese strains.

同期刊论文项目
同项目期刊论文
期刊信息
  • 《中国病毒学:英文版》
  • 中国科技核心期刊
  • 主管单位:中国科学院
  • 主办单位:中国科学院武汉病毒研究所 中国微生物学会
  • 主编:陈新文
  • 地址:湖北省武汉市武昌区小洪山中区44号
  • 邮编:430071
  • 邮箱:info@virosin.org
  • 电话:027-87199157
  • 国际标准刊号:ISSN:1674-0769
  • 国内统一刊号:ISSN:42-1760/Q
  • 邮发代号:38-351
  • 获奖情况:
  • 湖北省第1、2、3、4、5、6届优秀期刊,中国科学技术学会 优秀国际科技期刊,2012年中国国际影响力优秀学术期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),波兰哥白尼索引,荷兰医学文摘,美国生物医学检索系统,美国剑桥科学文摘,美国生物科学数据库,中国中国科技核心期刊
  • 被引量:208