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引物末端不同碱基对聚合酶链反应产物影响
  • ISSN号:1001-0580
  • 期刊名称:《中国公共卫生》
  • 时间:0
  • 分类:R512[医药卫生—临床医学;医药卫生—内科学]
  • 作者机构:[1]上海理工大学生物热科学研究所,上海200093, [2]吉林大学第一医院放射线科
  • 相关基金:国家自然科学基金(50676063);上海市重点学科建设项目(T0503)
中文摘要:

目的探索引物末端3′端不同碱基对聚合酶链反应产物的影响。方法以含有乙肝病毒(HBV)完整基因组的重组质粒pUC-19为模板,利用3′端碱基分别为A,T,C,G的下游引物,在相同的上游引物和退火温度下进行聚合酶链反应。结果不同的反应体系在相同退火温度下目的产物和引物二聚体形成不同 A表示上游引物,P表示下游引物 下游引物共计4条,分别用P1、P2、P3、P4表示,其3′端碱基分别为T,G,A,C。上下游引物共4对,分别用AP1、AP2、AP3、AP4表示 退火温度为50℃时,AP1和AP4有明显的扩增产物,AP3扩增产物稍少,AP2产物肉眼观察不到,有非特异性产物生成 退火温度升至55℃时,AP1和AP2有明显的扩增产物,AP4少量扩增产物,P3产物肉眼观察不到,AP1和AP4反应体系引物二聚体生成情况基本相同,AP2和AP3引物二聚体生成较少 退火温度升至62℃时,AP1和AP2有明显的扩增产物,AP4扩增产物稍少,AP3产物肉眼观察不到,可观察到引物二聚体生成稍多。结论3′端不同碱基对聚合酶链反应产物有很大影响。

英文摘要:

Objective To explore the effects of different bases at 3' end of the primer on products of polymerase chain reaction. Methods HBV gene was amplified by PCR in the same forward primer and anneal temperature. Recombinant plasmid pUC-19 carrying whole HBV genome was used as a template and the base at the 3' end of the reverse primer was T ( AP1 ), G ( AP2), A ( AP3 ), and C ( AP4 ), respectively. Results The form of production and primer-dimer of different reaction systems in the same anneal temperature were different. When anneal temperature was 50 ℃ ,reaction systems of AP1 and AP4 had visible amplification products. AP3 had small quantities of amplification products. Amplification products of AP2 could not be observed and non-specific products were generated. When anneal temperature was 55 ℃,reaction systems of AP1 and AP2 had visible amplification products; AP4 had small quantities of amplification products. Amplification products of AP2 could not be observed. Reaction systems of AP1 and AP4 had the same quantities of primer dimers. Reaction systems of AP2 and AP3 had less primer dimers. When anneal temperature rised to 62 ℃ ,reaction systems of AP1 and AP2 had visible amplification products and AP4 had small quantifies of amplification products. Amplification products of AP3 could not be observed,while primer dimers coulde be observed. Conclusion The different bases at 3' end of the primer effectes deeply on products of PCR.

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期刊信息
  • 《中国公共卫生》
  • 北大核心期刊(2011版)
  • 主管单位:国家卫生和计划生育委员会
  • 主办单位:中华预防医学会
  • 主编:王宇
  • 地址:沈阳市和平区砂阳路242号
  • 邮编:110005
  • 邮箱:zgggws@vip.sina.com
  • 电话:024-23388443 23388479
  • 国际标准刊号:ISSN:1001-0580
  • 国内统一刊号:ISSN:21-1234/R
  • 邮发代号:8-204
  • 获奖情况:
  • 1999年获中华预防医学会系列期刊优秀期刊二等奖,2000年获中华预防医学会系列期刊优秀期刊三等奖,国家期刊提名奖
  • 国内外数据库收录:
  • 美国化学文摘(网络版),中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:66800