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铁皮石斛促分裂原活化蛋白激酶基因DoMPK2的分子特征
  • ISSN号:1001-2494
  • 期刊名称:《中国药学杂志》
  • 时间:0
  • 分类:R97[医药卫生—药品;医药卫生—药学]
  • 作者机构:[1]陕西中医学院药学院,陕西省中药基础与新药研究重点实验室,西安712046, [2]中国医学科学院-北京协和医学院药用植物研究所,北京100193
  • 相关基金:基金项目:国家自然科学基金资助项目(31070300;31101608);陕西省青年科技新星计划项目(2012KJXX-44);陕西省教育厅专项科研计划项目(2013JK0829)
中文摘要:

目的克隆铁皮石斛(Dendrobium officinale)促分裂原活化蛋白激酶(mitogen—activated protein kinase,MAPK)基因DoMPK2并进行分子特征分析。方法采用反转录聚合酶链式反应(RT—PCR)、cDNA末端快速扩增(RACE)技术分离全长基因:生物信息学分析编码蛋白的理化特性、保守结构域等特征;用DNASTAR、MEGA软件分别进行氨基酸多序列比对和进化树构建分析;借助实时定量PCR技术检测基因组织表达模式。结果DoMPK2基因cDNA全长1585bp(GenBank注册号JX297595),编码一条由369个氨基酸组成的肽链,相对分子质量42120,等电点6.56。DoMPK2蛋白包含MAPK家族保守的丝氨酸/苏氨酸蛋白激酶催化结构域(32~-319)和MAP激酶的保守位点(67~170)。DoMPK2与多种植物MAPK基因高度相似(56%-84%),与水稻、玉米等单子叶植物MAPK基因亲缘关系较近。DoMPK2为组成型表达,其转录本在石斛种子和根中的相对表达量较高.分别为叶中的9.696、2.327倍,茎和叶中的表达变化不显著。结论DoMPK2基因的分子特征为进一步研究其在铁皮石斛生长发育、抗逆胁迫等生命活动过程中的生物学功能奠定基础。

英文摘要:

OBJECTIVE To clone and characterize a mitogen-activated protein kinase (MAPK) gene DoMPK2 in Dendrobium officinale. METHODS RT-PCR and RACE technologies were used for gene clone. Characteristics including the physicochemical properties and conserved domain of the deduced DoMPK2 protein were determined using a series of bioinformatics tools. The analyses of muhiple alignment and phylogenetic tree were performed using DNASTAR and MEGA softwares, respectively, qPCR was employed to examine the tissue specific expression pattern of DoMPK2. RESULTS The full length cDNA of DoMPK2 was l 585 bp ( GenBank ac- cession No. JX297595) and encoded a 369-aa protein with a molecular weight of 42. 12 kD and an isoelectric point (pl) of 6. 54. The deduced DoMPK2 protein contained the conserved serine/threonine- protein kinase catalytic domain (32 -319 ) and MAP kinase signa- ture (67 - 170). Multiple sequence alignment and phylogenetic analysis demonstrated that DoMPK2 was highly similar (56% -84% ) to MAPK genes from various plants and was closely related to rice and maize monocots. Real time quantitative PCR (qPCR) analysis revealed that DoMPK2 was constitutively expressed in the four included tissues. The transcripts were the most abundant in the seeds and roots, which were 9. 696 and 2. 327 fold over the leaves, and there had no significant expression in the stem and leaf samples. CONCLUSION Molecular characterization of DoMPK2 will be useful for further elucidation of the functions of this gene involving in the plant growth and development and stress response of D. officinale.

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期刊信息
  • 《中国药学杂志》
  • 中国科技核心期刊
  • 主管单位:中国科学技术协会
  • 主办单位:中国药学会
  • 主编:桑国卫
  • 地址:北京市朝阳区建外大街四号建外SOHO九号楼18层
  • 邮编:100022
  • 邮箱:zgyxzz@cpa.org.cn
  • 电话:010-58698009
  • 国际标准刊号:ISSN:1001-2494
  • 国内统一刊号:ISSN:11-2162/R
  • 邮发代号:2-232
  • 获奖情况:
  • 首届国家期刊奖,第一、二届全国优秀科技期刊一等奖,中国期刊方阵“双高”期刊
  • 国内外数据库收录:
  • 美国国际药学文摘,美国化学文摘(网络版),荷兰文摘与引文数据库,荷兰医学文摘,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),英国英国皇家化学学会文摘,中国北大核心期刊(2000版)
  • 被引量:54982