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Novel pleiotropic loci controlling panicle architecture across environments in japonica rice (Oryza sativa L.)
  • ISSN号:1673-8527
  • 期刊名称:《遗传学报:英文版》
  • 时间:0
  • 分类:S828.2[农业科学—畜牧学;农业科学—畜牧兽医] U467.521[机械工程—车辆工程;交通运输工程—载运工具运用工程;交通运输工程—道路与铁道工程]
  • 作者机构:[1]State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China, [2]Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, China
  • 相关基金:Acknowledgements This work was supported by the Program for Changjiang Scholars and Innovative Research Team of Nanjing Agriculture University (No. IRT0432). We thank Dr. Guo-Liang Jiang of South Dakota University, USA, for his helpful comments to the manuscript.
中文摘要:

识别在装饰用的梨树米饭控制圆锥花序建筑学的量的特点 loci (QTL ) ,一张基因地图基于简单顺序重复(SSR ) 被构造生来的线(RIL ) 从在栽培变种 Xiushui 79 和 C Bao 之间的一个十字导出的标记和 254 recombinant。七个圆锥花序特点在三环境下面被调查。单个标记分析显示 27 个 SSR 标记的一个总数高度在所有三环境与圆锥花序特点被联系。单个地点解释的 phenotypic 变化的百分比从 2% ~ 35% 变化了。基于混合线性模型,为七个圆锥花序特点的 40 添加剂 QTL 的一个总数被合成间隔印射检测,向 1.2% 鈥 ? 解释 5% phenotypic 变化。在有超过10%解释 phenotypic 变化的 9 QTL 之中,二 QTL 每圆锥花序( NPB )为主要分支的数字,二为圆锥花序长度( PL ),二为小穗状花小穗密度( SD ),为第二等的分支的数字的每圆锥花序( NSB ),为第二等的分支分发密度( SBD )的,和为小穗状花小穗的数字的每圆锥花序( NS )分别地。qPLSD-9-1 和 qPLSD-9-2 是新奇多种的 loci,同时显示出 PL 和 SD 上的效果。qPLSD-9-1 为 PL 解释了 34.7% phenotypic 变化并且为 SD 的 25.4% phenotypic 变化分别地。qPLSD-9-2 分别地为 PL 和 SD 解释了 34.9% phenotypic 变化和 24.4% 。在两 QTL 的 C Bao 等位基因证明 PL 上的积极效果,和在两 QTL 的 Xiushui 79 等位基因在 SD 上显示出积极效果。圆锥花序特点的基因变化主要被归因于添加剂效果。QTL 脳环境相互作用不为添加剂 QTL 和添加剂脳添加剂 QTL 对是重要的。

英文摘要:

To identify quantitative trait loci (QTLs) controlling panicle architecture in japonica rice, a genetic map was constructed based on simple sequence repeat (SSR) markers and 254 recombinant inbred lines (RILs) derived from a cross between cultivars Xiushui 79 and C Ban. Seven panicle traits were investigated under three environments. Single marker analysis indicated that a total of 27 SSR markers were highly associated with panicle traits in all the three environments. Percentage of phenotypic variation explained by single locus varied from 2% to 35%. Based on the mixed linear model, a total of 40 additive QTLs for seven panicle traits were detected by composite interval mapping, explaining 1.2%--35% ofphenotypic variation. Among the 9 QTLs with more than 10% of explained phenotypic variation, two QTLs were for the number of primary branches per panicle (NPB), two for panicle length (PL), two for spikelet density (SD), one for the number of secondary branches per panicle (NSB), one for secondary branch distribution density (SBD), and one for the num- ber of spikelets per panicle (NS), respectively, qPLSD-9-1 and qPLSD-9-2 were novel pleiotropic loci, showing effects on PL and SD simultaneously, qPLSD-9-1 explained 34.7% of the phenotypic variation for PL and 25.4% of the phenotypic variation for SD, respec- tively, qPLSD-9-2 explained 34.9% and 24.4% of the phenotypic variation for PL and SD, respectively. The C Bao alleles at the both QTLs showed positive effects on PL, and the Xiushui 79 alleles at the both QTLs showed positive effects on SD. Genetic variation of panicle traits are mainly attributed to additive effects. QTLx environment interactions were not significant for additive QTLs and additive x additive QTL pairs.

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期刊信息
  • 《遗传学报:英文版》
  • 北大核心期刊(2004版)
  • 主管单位:中国科学院
  • 主办单位:中国科学院遗传与发育生物学研究所 中国遗传学会
  • 主编:薛勇彪
  • 地址:北京市安定门外大屯路中科院遗传发育所
  • 邮编:100101
  • 邮箱:ycxb@genetics.ac.cn
  • 电话:010-64807669
  • 国际标准刊号:ISSN:1673-8527
  • 国内统一刊号:ISSN:11-5450/R
  • 邮发代号:2-819
  • 获奖情况:
  • 1996年获中科院优秀期刊二等奖,1997年获全国优秀期刊三等奖,200年获中科院优秀期刊二等奖
  • 国内外数据库收录:
  • 俄罗斯文摘杂志,美国化学文摘(网络版),英国农业与生物科学研究中心文摘,波兰哥白尼索引,荷兰文摘与引文数据库,荷兰医学文摘,美国生物医学检索系统,美国科学引文索引(扩展库),美国生物科学数据库,英国动物学记录,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2000版)
  • 被引量:17519