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辣椒TPS家族成员的鉴定与CaTPS1的表达分析
  • ISSN号:0513-353X
  • 期刊名称:《园艺学报》
  • 时间:0
  • 分类:S641.3[农业科学—蔬菜学;农业科学—园艺学]
  • 作者机构:[1]甘肃农业大学园艺学院,兰州730070, [2]甘肃省农业科学院蔬菜研究所,兰州730070
  • 相关基金:国家自然科学基金项目(31560555); 农业部园艺作物生物学与种质创制学科群西北地区蔬菜科学观测试验站项目(2015-A2621-620321-G1203-066); 甘肃省农业科学院科技创新工程学科团队项目(2015GAAS01);甘肃省农业科学院中青年基金项目(2014GAAS27)
中文摘要:

利用生物信息学方法,从辣椒全基因组数据库中共鉴定出11个辣椒TPS基因,除Ca TPS3含有1个TPS和2个TPP结构域外,其余分别含有1个TPS和1个TPP结构域。11个Ca TPS分为2类,ClassⅠ包含3个基因(Ca TPS1~Ca TPS3),分别含有16、16和13个内含子,Ca TPS1和Ca TPS2含Motif 1~Motif 5各1个,而Ca TPS3含有2个Motif 4和1个Motif 3。ClassⅡ包含8个基因(Ca TPS4~Ca TPS11),均含有2个内含子,且分别含Motif 1~Motif 6各1个。利用荧光定量PCR对Ca TPS1在辣椒组织表达的特异性和低温应答模式进行分析,结果表明:Ca TPS1在叶片中的表达量大约是根和茎中的5~6倍,说明Ca TPS1的表达具有明显的组织特异性;低温处理后Ca TPS1在根和茎中的表达高峰出现时间明显早于叶片,说明不同组织中Ca TPS1对低温胁迫的应答时间存在一定差异。

英文摘要:

Trehalose and the precursor trehalose-6-phosphate participate in responding to abiotic stress as the osmotic regulator and the signaling molecule.Trehalose-6-phosphate synthase(TPS) is one of the most important enzyme among the synthesis mechanism of trehalose-6-phosphate,and plays an important role in the metabolic pathway of trehalose.The over expression of TPS gene can improve crop's tolerance to abiotic stress.Based on pepper genome database,11 genes of CaTPS family were identified by bioinformatics methods.Besides CaTPS3 contains one TPS and two TPP domains,the rest of 10 CaTPS family genes contain one TPS and one TPP domain.All 11 CaTPS family genes were classified into two classes according to their gene structure and phenogenesis.CaTPS1,CaTPS2 and CaTPS3 are grouped to Class Ⅰ.CaTPS1 and CaTPS2 respectively contains 16 introns and 5 motifs from motif 1 to motif 5,while CaTPS3 contains 13 introns,one motif 3 and two motif 4.The rest eight genes from CaTPS4 to CaTPS 11 respectively contains two introns and six motifs from motif 1 to motif 6,and they are grouped to Class Ⅱ.The expression of tissue specificity and response to low temperature stress of CaTPS1 were analyzed in hot pepper using quantitative real-time PCR.The results showed that the expressive quantity of CaTPS1 gene in leaves were five to six times than that in stems and roots,this indicated that the expression of CaTPS1 appeared obvious tissue specificity in hot pepper.After treated with low temperature,the expressing peak of CaTPS1 in roots and stems appeared earlier than that in leaves,which suggested that the responding times to abiotic stress of CaTPS1 were no accordance between different tissues.

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期刊信息
  • 《园艺学报》
  • 中国科技核心期刊
  • 主管单位:中国科协
  • 主办单位:中国园艺学会
  • 主编:杜永臣
  • 地址:北京市中关村南大街12号
  • 邮编:100081
  • 邮箱:ivfyyxb@mail.caas.net.cn
  • 电话:010-68919523
  • 国际标准刊号:ISSN:0513-353X
  • 国内统一刊号:ISSN:11-1924/S
  • 邮发代号:82-471
  • 获奖情况:
  • 第一届全国优秀期刊奖,中国科协第三届优秀期刊奖,第二届国家期刊奖提名奖,中国期刊方阵“双效”期刊
  • 国内外数据库收录:
  • 美国化学文摘(网络版),英国农业与生物科学研究中心文摘,日本日本科学技术振兴机构数据库,中国中国科技核心期刊,中国北大核心期刊(2004版),中国北大核心期刊(2008版),中国北大核心期刊(2011版),中国北大核心期刊(2014版),中国北大核心期刊(2000版)
  • 被引量:43371